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Shiny
•
reset
0
votes
0
replies
570
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
22 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
815
views
Error in ChAMP GUI
ChAMP
shiny
ChAMPdata
updated 2.2 years ago by
anna.stanislawska
• 0 • written 2.2 years ago by
Mari
• 0
0
votes
0
replies
770
views
Export Results from BatchQC Shiny App
BatchQC
RNA-seq
R
Shiny
batch-effect
4.1 years ago
manninm
• 0
0
votes
1
reply
950
views
AnnotationHub display() gives JavaScript Alert and DataTables warning
AnnotationHub
Shiny
Rstudio
updated 4.2 years ago by
shepherl
3.9k • written 4.2 years ago by
bwiley4
• 0
6
votes
0
replies
1.3k
views
News:
Winners of the 1st Shiny Contest: iSEE
iSEE
shiny
summarizedExperiment
News
5.1 years ago
Aaron Lun
★ 28k
0
votes
7
replies
1.5k
views
Problems with DESeq2 'design' parameter using Shiny/rhandsontable
deseq2
shiny
design
rhandsontable
hot_to_r()
updated 5.2 years ago by
Michael Love
42k • written 5.2 years ago by
hinkel2
• 0
0
votes
1
reply
1.9k
views
DEBrowser shiny - Maximum upload size exceeded - error
DEBrowser
shiny
5.4 years ago
tomasfly
• 0
0
votes
3
replies
1.4k
views
browseGenome with Shiny
rtracklayer
browsegenome
shiny
updated 5.6 years ago by
Michael Lawrence
★ 11k • written 5.6 years ago by
vivek82
• 0
12
votes
3
replies
6.1k
views
Error while uploading Bioconductor packages - R Shiny
shiny
package
deploy
6.2 years ago
lloyd.izard
▴ 80
3
votes
3
replies
1.4k
views
Sharing SC3_interactive results
SC3
single-cell
shiny
updated 7.0 years ago by
Vladimir Kiselev
▴ 150 • written 7.0 years ago by
cfustero
▴ 20
0
votes
1
reply
1.6k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
7.6 years ago • updated 7.4 years ago
Yuan Tian
▴ 90
0
votes
1
reply
1.2k
views
R packages developed using shiny
shiny
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
bhakti.dwivedi
• 0
1
vote
1
reply
1.3k
views
reactive CellCODE heatmap
cellcode
shiny
heatmap
updated 8.1 years ago by
Andrzej Oleś
▴ 750 • written 8.1 years ago by
christopher.clarskon15
▴ 20
0
votes
1
reply
1.6k
views
shiny account on mac not deploying server
limmagui
shiny
8.1 years ago
christopher.clarskon15
▴ 20
7
votes
0
replies
3.7k
views
Tutorial:
New edX "Data analysis for Life Sciences" module: High performance computing for reproducible genomics
annotation
genomicranges
visualization
docker
shiny
Tutorial
8.2 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.8k
views
Shiny - error messages with validate
R
validate
shiny
8.6 years ago
alptaciroglu
▴ 50
1
vote
7
replies
2.8k
views
Shiny app for RefNet, PSICQUIC: annotated protein/protein interactions
shiny
network
interactions
9.6 years ago
pshannon
▴ 100
17 results • Page
1 of 1
Recent ...
Replies
Comment: Volcano plot of scRNA-seq data not "centered"
by
Michael Love
42k
Agree with @atpoint Depending on the "groups" in single cell, the question of DE can be not well defined without inserting additional inf…
Answer: Volcano plot of scRNA-seq data not "centered"
by
ATpoint
★ 4.2k
Sounds like a normalization problem, but I am not sure how to help with that. Indeed you can use control genes, for example use the top 20%…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
ATpoint
★ 4.2k
I was talking about the command line version.
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
• 0
I tried reading in the .csv version of the SAF with header = F and I'm still getting an error. I'm running: ``` counts <- featureCounts( …
Comment: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
by
jovel_juan
▴ 30
enrichPlot requirements are rather low. All what it needs is to provide few columns named specifically. I student of mine wrote the first v…
Votes
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Answer: Documenting resources in an `ExperimentHub` package?
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Seurat/DESeq2 - single cell RNA-seq differential expression
Seurat to SingleCellExperiment Converting error in MAC
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Gordon Smyth
50k
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jovel_juan
▴ 30
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ATpoint
★ 4.2k
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▴ 720
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