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Showing :
copywriteR
•
reset
0
votes
2
replies
317
views
Error in if (nrow(peaks) > 0) { : argument is of length zero Calls: CopywriteR ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous> Execution h…
CopywriteR
CopyhelpeR
7 weeks ago • updated 6 weeks ago
fer_talavera
• 0
0
votes
1
reply
562
views
CopywriteR output
CopywriteR
updated 6 weeks ago by
fer_talavera
• 0 • written 2.5 years ago by
Joshua
• 0
2
votes
4
replies
912
views
CopywriteR job runs out of memory
copywriter
cnv
updated 4.1 years ago by
oscarkrijgsman
▴ 20 • written 4.1 years ago by
Ram
▴ 210
0
votes
1
reply
912
views
CopywriteR - low coverage-regions display very low numbers
copywriter
copynumber
updated 5.7 years ago by
t.kuilman
▴ 170 • written 5.7 years ago by
magdaaverte
• 0
3
votes
12
replies
2.1k
views
S4Vectors and subectHits error
s4vectors
copywriter
updated 6.1 years ago by
Michael Lawrence
★ 11k • written 6.1 years ago by
TriS
▴ 200
1
vote
2
replies
1.8k
views
BiocParallel and CopywriteR Error
bioconductor
biocparallel
copywriter
updated 6.9 years ago by
Martin Morgan
25k • written 6.9 years ago by
genomic8328
▴ 10
0
votes
1
reply
1.1k
views
Problems with CopywriteR
copywriter
updated 7.2 years ago by
t.kuilman
▴ 170 • written 7.2 years ago by
filipzembol
• 0
0
votes
1
reply
1.6k
views
CopywriteR: CNV calling on normals samples / gaps in chromosomes
copynumber
cnvtools
cnv
copywriteR
updated 7.8 years ago by
t.kuilman
▴ 170 • written 7.8 years ago by
ahinsahr11
• 0
0
votes
3
replies
1.4k
views
CopywriteR error: "Error in .Method"
CopywriteR
7.9 years ago
Tom
▴ 10
1
vote
3
replies
1.4k
views
CopywriteR can't finish calculating copy number
copywriter
bam
updated 8.0 years ago by
t.kuilman
▴ 170 • written 8.0 years ago by
thestaroceanster
• 0
3
votes
3
replies
3.8k
views
Preparing CopywriteR output for GISTIC 2.0 analysis
copywriter
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.2 years ago by
jcarter
• 0
2
votes
4
replies
2.4k
views
Visualizing CopywriteR's segmentation output in IGV
copywriter
dnacopy
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.2 years ago by
jcarter
• 0
1
vote
2
replies
1.3k
views
Copywriter output looks strange
copywriter
8.2 years ago
MatthewGField
▴ 10
2
votes
9
replies
2.5k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
smcnulty
• 0
0
votes
7
replies
2.0k
views
Multithreading CopywriteR on SLURM cluster
copywriter
slurm
openMPI
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
smcnulty
• 0
0
votes
1
reply
1.4k
views
CopywriteR - choosing optimal bin size for targeted sequencing panel
copywriter
bin size
targeted sequencing
updated 8.2 years ago by
t.kuilman
▴ 170 • written 8.2 years ago by
sshung
• 0
2
votes
1
reply
1.2k
views
Copyhelper: Preprocession of mappability
CopywriteR
updated 8.4 years ago by
t.kuilman
▴ 170 • written 8.4 years ago by
Felix
• 0
17 results • Page
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Answer: Errors in chromosome annotation-biomaRt
by
James W. MacDonald
65k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat
by
James W. MacDonald
65k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons
by
James W. MacDonald
65k
In that case, probably easiest to subset to the groups being compared.
Comment: Help with ENmix readidat
by
minardsmitha
▴ 10
Did you figure this out? I have the same issue.
Comment: LRT, more than two conditions and pairwise comparisons
by
boczniak767
▴ 720
Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …
Votes
Comment: DESeq2- Mysterious interaction suppresses DEGs
Answer: DESeq2- Mysterious interaction suppresses DEGs
Answer: Subsetting RNAseq data | voomaByGroup()
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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