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Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
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Your bam file names should be stored in a vector and then provided to the `files` parameter.
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Agree with @atpoint
Depending on the "groups" in single cell, the question of DE can be not well defined without inserting additional inf…
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Sounds like a normalization problem, but I am not sure how to help with that. Indeed you can use control genes, for example use the top 20%…
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I tried reading in the .csv version of the SAF with header = F and I'm still getting an error. I'm running:
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