Bioconductor LmFit

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937

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limma lmfit R DifferentialExpression

updated 2.0 years ago by ATpoint ★ 4.2k • written 2.0 years ago by Dimitris • 0

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1.3k

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lmFit

updated 2.0 years ago by Gordon Smyth 50k • written 2.9 years ago by AyHi • 0

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777

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minfi limma lmm lmfit dmpFinder

3.0 years ago kyleyxw • 0

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1.1k

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lmFit

3.1 years ago • updated 2.9 years ago AyHi • 0

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1.5k

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limma voom lmfit ebayesfit

updated 4.1 years ago by Gordon Smyth 50k • written 4.1 years ago by sa825 • 0

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736

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limma lmFit mean expression level

updated 4.2 years ago by James W. MacDonald 66k • written 4.2 years ago by anna • 0

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917

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limma lmfit

updated 5.1 years ago by Aaron Lun ★ 28k • written 5.1 years ago by mouton.alice ▴ 10

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1.1k

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limma lmfit voom limma design matrix voomwithqualityweights

updated 5.4 years ago by Gordon Smyth 50k • written 5.4 years ago by kediggins ▴ 10

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1.6k

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limma lmfit design matrix r

updated 5.9 years ago by Aaron Lun ★ 28k • written 5.9 years ago by anupriya.dalmia • 0

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1.7k

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model.matrix lmFit eBayes GEOquery limma

6.3 years ago darthratus • 0

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1.7k

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limma lmfit model.matrix differential gene expression

6.7 years ago stinehedensted • 0

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2.4k

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limma contrast missing data lmfit makecontrasts

updated 6.7 years ago by Gordon Smyth 50k • written 6.8 years ago by wewolski ▴ 10

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1.2k

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limma lmfit weight individual

7.2 years ago stephane.cauchi ▴ 10

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1.3k

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limma agilent microarray lmfit model.matrix

updated 7.5 years ago by Gordon Smyth 50k • written 7.5 years ago by Maximilian ▴ 10

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1.9k

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limma illumina450k lmfit

updated 7.5 years ago by Ryan C. Thompson ★ 7.9k • written 7.5 years ago by DSP • 0

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1.6k

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limma agilent microarrays lmfit

updated 7.9 years ago by Gordon Smyth 50k • written 7.9 years ago by Jesse L. • 0

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4.2k

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lmfit

updated 8.5 years ago by Gordon Smyth 50k • written 8.5 years ago by libya.tahani • 0

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2.5k

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limma illumina microarray lmfit differential gene expression

updated 8.8 years ago by James W. MacDonald 66k • written 8.8 years ago by kanacska ▴ 10

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2.4k

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limma logfc lmfit

updated 9.0 years ago by Aaron Lun ★ 28k • written 9.0 years ago by Moritz E. Beber ▴ 10

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2.2k

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limma lmFit

updated 9.4 years ago by Gordon Smyth 50k • written 13.1 years ago by Peter Davidsen ▴ 210

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4.8k

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limma lmFit

updated 9.4 years ago by Gordon Smyth 50k • written 10.0 years ago by Arvid Sondén ▴ 40

21 results • Page 1 of 1

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Comment: GSVA function by Robert Castelo ★ 3.3k

No, negative values may occur after log transformation when the `log(x)` is taken from a positive number `x with 0 < x < 1`, and therefore …

Comment: conumee with Infinium MethylationEPIC v2.0 by sgomez • 0

Hi Max, Could you try this? https://support.bioconductor.org/p/9136138/#9136840

Comment: Error in render R qmd document (could not find function "process") by ATpoint ★ 4.2k

This is not related to Bioconductor, and even if it was, please understand that without code one cannot debug these questions. The most obv…

Comment: GSVA function by michelafrancesconi8 • 0

When I log trasform my matrix after the DESeq2 normalization, I have some negative value, should I add a 1 to all my matrix? Thank you Mi…

Comment: Normalisation using clinical traits in RNA seq using DESeq2 by sukeshinik5 • 0

Thank you, so much for the response. When we estimate factors of unwanted variable, which is the better options for factorisation of the va…

Votes

DiffBind Batch Effect

A: DiffBind Batch Effect

C: DiffBind Batch Effect

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Popular Question to Robert Castelo ★ 3.3k