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News: European Bioconductor Conference 2023 planning
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News: Join the Technical Advisory Board
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12 months ago Maria Doyle ▴ 70
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News: Final List of Deprecated Package Bioc 3.9
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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12 months ago Maria Doyle ▴ 70
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News: Registrations are now open for BioC Asia 2022
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19 months ago • updated 18 months ago Peter Hickey ▴ 740
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News: BioCAsia Virtual Meeting, 15-18 October 2020
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News: New Bioconductor Community Advisory Board Members for 2021
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3.1 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board
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News: Early career researchers: nominate to present your work at BVCN virtual conference on microbiome research
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3.3 years ago Matthew Ritchie ▴ 1000
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3.6 years ago shepherl 3.9k
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DESeq2 multiple groups comparison issues, incorrect log2FC results in a small proportion of genes
deseq2
updated 3.5 years ago by 42k • written 3.6 years ago by • 0
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News: Final List of Deprecated Packages for Bioc3.12
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3.6 years ago shepherl 3.9k
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News: BridgeDbR devel package upgraded to BridgeDb 3
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3.6 years ago egon.willighagen ▴ 10
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
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3.6 years ago kayla.interdonato ▴ 160
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3.6 years ago Laurent Gatto 1.6k
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News: List of Deprecated Packages for Bioc3.12
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3.7 years ago • updated 3.6 years ago shepherl 3.9k
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News: New Package Submission Deadline for Bioc Release 3.12
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3.6 years ago shepherl 3.9k
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News: Bioconductor Release 3.12 Schedule Posted
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3.7 years ago shepherl 3.9k
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News: ensembldb EnsDb databases for Ensembl release 101 added to AnnotationHub
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3.7 years ago Johannes Rainer ★ 2.0k
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News: Ensembl 101 hase been released
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3.7 years ago mchakiachvili ▴ 20
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News: New Package Submission Workflow Updates!
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections
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4.1 years ago • updated 3.9 years ago shepherl 3.9k
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections Still Open
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3.9 years ago shepherl 3.9k
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News: Award Nomination Deadline Monday June 15th!
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3.9 years ago shepherl 3.9k
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3.9 years ago shepherl 3.9k
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3.9 years ago shepherl 3.9k
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3.9 years ago shepherl 3.9k
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News: List of Deprecated Packages for Bioc3.12
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3.9 years ago shepherl 3.9k
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News: New Package Bioconductor Award
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3.9 years ago shepherl 3.9k
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4.0 years ago shepherl 3.9k
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News: Bioc2020 - Virtual Conference Registration
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4.0 years ago shepherl 3.9k
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719
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News: Updated annotation packages
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4.0 years ago kayla.interdonato ▴ 160
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News: Nominations for Bioconductor Awards!
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4.1 years ago • updated 4.0 years ago shepherl 3.9k
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News: Single Package Builder / New Package Submission
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4.0 years ago shepherl 3.9k
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News: Bioconductor Technical Advisory Board Nominees, 2020
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written 4.0 years ago by 25k
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News: Public Calendar of Events
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4.0 years ago shepherl 3.9k
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News: ensembldb EnsDb databases for Ensembl release 100 added to AnnotationHub
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4.0 years ago Johannes Rainer ★ 2.0k
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933
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News: Issues with annotation packages
annotation news release News
4.0 years ago kayla.interdonato ▴ 160
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.1 years ago by ▴ 160 • written 4.1 years ago by 3.9k
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893
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News: Bioconductor 3.11 OrgDb and TxDb packages now available
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4.1 years ago kayla.interdonato ▴ 160
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798
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News: Ensembl 100 has been released
biomart ensembl e100 mart news News
4.1 years ago Thomas Maurel ▴ 800
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828
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.1 years ago shepherl 3.9k
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News: BridgeDb build fails due to website unavailability
bridgedbr News
4.5 years ago • updated 4.1 years ago egon.willighagen ▴ 10
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888
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News: Import Deadlines for RELEASE 3.11
release devel deadline bioconductor News
4.1 years ago shepherl 3.9k
10
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2.7k
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News: Professor James Taylor
in memoriam News
4.1 years ago Martin Morgan 25k
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863
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News: Last Day to Submit New Packages for Bioconductor Release 3.11
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4.1 years ago shepherl 3.9k
2
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835
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News: Bioconductor Community Advisory Board Members
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4.1 years ago Matthew Ritchie ▴ 1000
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
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4.2 years ago • updated 4.1 years ago shepherl 3.9k
50 results • Page 1 of 1
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Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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