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Join the Technical Advisory Board
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12 months ago
Maria Doyle
▴ 70
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Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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• 0 • written 19 months ago by
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19 months ago • updated 18 months ago
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3.1 years ago
Matthew Ritchie
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3.3 years ago
Matthew Ritchie
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• 0 • written 3.3 years ago by
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3.6 years ago
shepherl
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DESeq2 multiple groups comparison issues, incorrect log2FC results in a small proportion of genes
deseq2
updated 3.5 years ago by
Michael Love
42k • written 3.6 years ago by
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News:
BridgeDbR devel package upgraded to BridgeDb 3
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3.6 years ago
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Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
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3.6 years ago
kayla.interdonato
▴ 160
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Project-wide Code of Conduct statement for Bioconductor
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3.6 years ago
Laurent Gatto
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Final List of Deprecated Packages for Bioc3.12
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3.6 years ago
shepherl
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shepherl
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3.7 years ago
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BioCAsia Virtual Meeting, 15-18 October 2020
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Matthew Ritchie
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3.7 years ago • updated 3.6 years ago
shepherl
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News:
ensembldb EnsDb databases for Ensembl release 101 added to AnnotationHub
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Johannes Rainer
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Ensembl 101 hase been released
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3.7 years ago
mchakiachvili
▴ 20
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James Taylor foundation: scholarships to Biological Data Science 2020 at CSHL
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Kasper Daniel Hansen
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• 0 • written 3.9 years ago by
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shepherl
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shepherl
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shepherl
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shepherl
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3.9 years ago
shepherl
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3.9 years ago
shepherl
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808
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New Package Bioconductor Award
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3.9 years ago
shepherl
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4.0 years ago
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shepherl
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kayla.interdonato
▴ 160
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shepherl
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25k
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Public Calendar of Events
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shepherl
3.9k
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ensembldb EnsDb databases for Ensembl release 100 added to AnnotationHub
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Johannes Rainer
★ 2.0k
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933
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4.0 years ago
kayla.interdonato
▴ 160
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893
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Bioconductor 3.11 OrgDb and TxDb packages now available
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4.1 years ago
kayla.interdonato
▴ 160
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798
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Thomas Maurel
▴ 800
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828
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4.1 years ago
shepherl
3.9k
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888
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4.1 years ago
shepherl
3.9k
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4.1 years ago • updated 4.0 years ago
shepherl
3.9k
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News:
Professor James Taylor
in memoriam
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4.1 years ago
Martin Morgan
25k
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0
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863
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Last Day to Submit New Packages for Bioconductor Release 3.11
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4.1 years ago
shepherl
3.9k
2
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835
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News:
Bioconductor Community Advisory Board Members
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4.1 years ago
Matthew Ritchie
▴ 1000
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News:
Bioc2020 - Call for BOF/HAK/FAQ Sections
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4.1 years ago • updated 3.9 years ago
shepherl
3.9k
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3
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1.0k
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News:
Final List of Deprecated Packages for Bioc3.11
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News
updated 4.1 years ago by
kayla.interdonato
▴ 160 • written 4.1 years ago by
shepherl
3.9k
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748
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News:
Deadline for devel branch 3.11 to pass R CMD build and R CMD check
release
devel
bioconductor
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4.1 years ago
shepherl
3.9k
0
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0
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710
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News:
Bioconductor Release 3.10 Code Freeze Deadline
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4.1 years ago
shepherl
3.9k
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677
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News:
Bioconductor 3.11 db0s are available
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4.1 years ago
kayla.interdonato
▴ 160
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Replies
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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