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ubuntu
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0
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6
replies
4.2k
views
cummeRbund installation error on Ubuntu 14.04
software error
cummerbund
ubuntu
9.4 years ago • updated 9.2 years ago
mbk0asis
• 0
2
votes
4
replies
1.6k
views
R package for Meta-Analysis of CHIP-Seq data
chipseq
meta-analysis
ubuntu
7.0 years ago
rezapanahi222
• 0
1
vote
5
replies
2.3k
views
Unable to install scde in ubuntu 16.04 , this is what happens when I install scde
scde
ubuntu
dependencies
R
updated 7.3 years ago by
Martin Morgan
25k • written 7.3 years ago by
aditya531996
• 0
0
votes
2
replies
2.3k
views
Unable to install DeSeq2 and EdgeR in ubuntu 16.04 , this is what happens when I install DeSeq2
deseq2
ubuntu
edger
dependencies
7.3 years ago
aditya531996
• 0
1
vote
4
replies
2.5k
views
biocLite updating problem with Ubuntu 17.10
ubuntu
biocgenerics
s4vectors
IRanges
annotationdbi
updated 6.4 years ago by
Martin Morgan
25k • written 6.4 years ago by
KRA
• 0
9
votes
32
replies
6.2k
views
Rsamtools v 1.99.6 installation error
Rsamtools
BiocManager
R 3.6
ubuntu
updated 5.0 years ago by
Hervé Pagès
16k • written 5.1 years ago by
kubovcij
• 0
2
votes
2
replies
2.4k
views
Error during installation of ChemmineOB R package
Chemmine
Ubuntu
OpenBabel
updated 8.0 years ago by
Thomas Girke
★ 1.7k • written 8.0 years ago by
elisa.micarelli
▴ 10
5
votes
2
replies
1.1k
views
Codelink annotation error in Ubuntu 16.04
codelink
annotation
ubuntu
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
Agaz Hussain Wani
▴ 260
1
vote
2
replies
1.6k
views
Multiple problems with TCGAbiolinks 2.2.6
software error
tcgabiolinks
ubuntu
updated 7.4 years ago by
Tiago Chedraoui Silva
▴ 260 • written 7.4 years ago by
lmorrill
• 0
0
votes
4
replies
2.3k
views
Biocgenerics updating problem on ubuntu 17.10
bioconductor
biocgenerics
ubuntu
package updates
r update
6.5 years ago
siinemselvi
• 0
1
vote
3
replies
1.9k
views
Error on zlib.h while installing esATAC on Ubutu
software error
esATAC
zlib.h
Ubuntu
Tutorial
updated 4.9 years ago by
Martin Morgan
25k • written 4.9 years ago by
vedbar
• 0
0
votes
1
reply
1.9k
views
DeSeq2 installation on ubuntu fails
deseq2
R
ubuntu
bioconductor
rstudio
updated 5.9 years ago by
Michael Love
42k • written 5.9 years ago by
drumarsohail
• 0
1
vote
1
reply
9.1k
views
Problems to install a package - Ubuntu
ubuntu
package
installation
varianttools
updated 9.0 years ago by
James W. MacDonald
65k • written 9.0 years ago by
lelemraposo
• 0
0
votes
5
replies
2.0k
views
Flowclust install probelms on Ubuntu
flowclust
ubuntu
install
error
9.0 years ago
gareth.howell
• 0
5
votes
2
replies
2.4k
views
how can I access my local files (data, R-scripts) from the *docker* R/Bioconductor?
docker
ubuntu
updated 8.7 years ago by
Dan Tenenbaum
★ 8.2k • written 8.7 years ago by
anton.kratz
▴ 60
0
votes
2
replies
8.6k
views
[SOLVED] BUG REPORT: Ubuntu 14.04 xps Installation libcrypto.so.10
xps
ubuntu
updated 8.2 years ago by
cstrato
★ 3.9k • written 8.2 years ago by
alexvpickering
▴ 110
0
votes
3
replies
2.8k
views
ERROR: compilation failed for package RSQLite
ubuntu
installation
updated 6.4 years ago by
Martin Morgan
25k • written 6.4 years ago by
Deleted
▴ 70
0
votes
1
reply
1.1k
views
mzR installation on Ubuntu 16.04
mzr
package installation
ubuntu
updated 6.2 years ago by
Laurent Gatto
1.6k • written 6.2 years ago by
buescher
• 0
18 results • Page
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Answer: ERROR; return code from pthread_create() is 22
by
James W. MacDonald
65k
Seems OK to me. ``` > dat <- ReadAffy() > dat AffyBatch object size of arrays=744x744 features (20 kb) cdf=HG-U219 (49386 affyids) …
Answer: LRT, more than two conditions and pairwise comparisons
by
James W. MacDonald
65k
Unless you think the different lines or tissues will have very different within-group variances, you should just analyze together and make …
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
by
James W. MacDonald
65k
It appears that batch is orthogonal to the treatment, so you can just fit a batch effect in your model.
Answer: Control group between 2 batches have different expression in RNAseq data
by
James W. MacDonald
65k
Since batch is orthogonal to the treatment, you just add a batch factor to your model.
Answer: Subsetting RNAseq data | voomaByGroup()
by
Anna
• 0
Hi Gordon. Thank you so much. Your reply is extremely helpful, and I feel more confident moving forward with the analysis. Also, very inte…
Votes
Answer: Subsetting RNAseq data | voomaByGroup()
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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