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2
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1.0k
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Comment: Comment: limma output for epic array methylation data
13 months ago James W. MacDonald 67k
0
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2
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1.9k
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Answer: Answer: DittoDimPlot errror: Cannot find 'NA' in this Seurat object
13 months ago James W. MacDonald 67k
2
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1
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1.0k
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Answer: Answer: limma output for epic array methylation data
13 months ago James W. MacDonald 67k
0
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0
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506
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Answer: Answer: the confuse issue in DEseq2 among multi group
13 months ago James W. MacDonald 67k
0
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0
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2.0k
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Comment: Comment: Get MANE transcripts from TxDb.Hsapiens.UCSC.hg38.knownGene
13 months ago James W. MacDonald 67k
0
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1
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810
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Comment: Comment: Help for SeqVarData function
13 months ago James W. MacDonald 67k
0
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0
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804
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Comment: Comment: Errors with makeTxDbFromBiomart
13 months ago James W. MacDonald 67k
0
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1
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804
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Comment: Comment: Errors with makeTxDbFromBiomart
13 months ago James W. MacDonald 67k
0
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0
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937
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Answer: Answer: unable to retrieve certain packages from bioconductor 3.15
13 months ago James W. MacDonald 67k
0
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0
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2.2k
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Comment: Comment: can't open mghp.osn.xsede.org
13 months ago James W. MacDonald 67k
0
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0
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439
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Answer: Answer: Rbowtie2 on windows
13 months ago James W. MacDonald 67k
1
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1
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1.6k
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Answer: Answer: ERROR in EnrichKEGG(), 'species should be listed' in, download method do not cha
13 months ago James W. MacDonald 67k
0
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1
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2.2k
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Comment: Comment: can't open mghp.osn.xsede.org
13 months ago James W. MacDonald 67k
1
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1
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1.1k
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Answer: Answer: can't install DESeq2 ("unable to access index for repository")
13 months ago James W. MacDonald 67k
0
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1
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804
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Answer: Answer: Errors with makeTxDbFromBiomart
13 months ago James W. MacDonald 67k
0
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0
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3.7k
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Comment: Comment: edgeR contrasts
14 months ago James W. MacDonald 67k
0
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0
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623
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Answer: Answer: EdgeR FTest
14 months ago James W. MacDonald 67k
0
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1
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1.9k
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Answer: Answer: removing the batch effect for vst counts and defining the batches in removeBatch
14 months ago James W. MacDonald 67k
0
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1
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780
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Answer: Answer: DEXSeqDataSet object DEXSeqDataSetFromHTSeq Error: line number did not have 3 e
14 months ago James W. MacDonald 67k
0
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1
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1.9k
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Answer: Answer: gseaplot2 from enrichplot for gene set enrichment analysis comparing two dataset
14 months ago James W. MacDonald 67k
0
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0
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502
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Answer: Answer: No such file or directory DESeq2
14 months ago James W. MacDonald 67k
1
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0
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1.7k
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Answer: Answer: bulk RNA-seq analysis using R : batch effect : One question concerning Combat-se
14 months ago James W. MacDonald 67k
0
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0
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2.6k
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Comment: Comment: Error using champ.import
14 months ago James W. MacDonald 67k
0
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0
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1.4k
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Comment: Comment: understanding differences in RSEM, STAR outputs and featureCounts
14 months ago James W. MacDonald 67k
0
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1
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1.4k
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Comment: Comment: understanding differences in RSEM, STAR outputs and featureCounts
14 months ago James W. MacDonald 67k
3
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0
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1.6k
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Answer: Answer: error message when I use the bsseq read.bismark command to read a genome wide cy
14 months ago James W. MacDonald 67k
1
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1
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648
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Answer: Answer: Few genes/transcripts in canFam (dog) TxDbs
14 months ago James W. MacDonald 67k
0
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1
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807
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Comment: Comment: Multi factor design and removing the effect of sex on main factor
14 months ago James W. MacDonald 67k
1
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1
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606
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Answer: Answer: Differential expression analysis with 7 factors (levels) at once?
14 months ago James W. MacDonald 67k
0
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1
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875
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Comment: Comment: DESeq2 & RUVseq model matrix is less than full rank
14 months ago James W. MacDonald 67k
2
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0
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2.7k
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Answer: Answer: Mouse to Human Genes using bioconductor
14 months ago James W. MacDonald 67k
0
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0
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512
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Comment: Comment: `R CMD check` failure on Linux for CoRegNet
14 months ago James W. MacDonald 67k
0
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0
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1.1k
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Comment: Comment: estimateDisp() error
14 months ago James W. MacDonald 67k
0
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1
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1.1k
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Comment: Comment: estimateDisp() error
14 months ago James W. MacDonald 67k
0
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1
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1.1k
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Comment: Comment: estimateDisp() error
14 months ago James W. MacDonald 67k
0
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0
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449
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Answer: Answer: cuffdiff-CummeRbund error
14 months ago James W. MacDonald 67k
0
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1
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807
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Answer: Answer: Multi factor design and removing the effect of sex on main factor
14 months ago James W. MacDonald 67k
0
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0
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679
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Answer: Answer: Relationship between gene_id and transcript_id genomic coordinates
14 months ago James W. MacDonald 67k
0
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1
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512
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Answer: Answer: `R CMD check` failure on Linux for CoRegNet
14 months ago James W. MacDonald 67k
0
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1
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585
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Answer: Answer: `R CMD check` failure on Linux for compartmap
14 months ago James W. MacDonald 67k
0
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2
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1.1k
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Answer: Answer: estimateDisp() error
14 months ago James W. MacDonald 67k
0
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0
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3.7k
views
Answer: Answer: Is it proper to compare two WGCNA matrixes if they were raised to different powe
14 months ago James W. MacDonald 67k
1
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1
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879
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Answer: Answer: biomaRt not retrieving complete list of functional consequences associated with
14 months ago James W. MacDonald 67k
1
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1
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1.1k
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Answer: Answer: Applicability of AUCell to bulk RNA-seq
14 months ago James W. MacDonald 67k
0
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0
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720
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Comment: Comment: Error in H5Fopen
14 months ago James W. MacDonald 67k
0
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1
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1.1k
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Answer: Answer: Error with makeTxDbFromBiomart
14 months ago James W. MacDonald 67k
0
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0
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652
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Answer: Answer: genomeStyles error in ChIPpeakAnno
14 months ago James W. MacDonald 67k
0
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0
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6.5k
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Answer: Answer: The MicrobiotaProcess package performed lefse analysis and had a problem drawing
14 months ago James W. MacDonald 67k
0
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1
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720
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Answer: Answer: Error in H5Fopen
14 months ago James W. MacDonald 67k
0
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0
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1.8k
views
Answer: Answer: Unable to install DESeq2
14 months ago James W. MacDonald 67k
8,581 results • Page 15 of 172
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