Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
250
views
Answer: Answer: problem reading bam files into nucleR
5 weeks ago James W. MacDonald 68k
0
votes
1
reply
254
views
Comment: Comment: Getting a large intercept with DESeq2
7 weeks ago James W. MacDonald 68k
0
votes
1
reply
254
views
Answer: Answer: Getting a large intercept with DESeq2
7 weeks ago James W. MacDonald 68k
2
votes
0
replies
483
views
Comment: Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
9 weeks ago James W. MacDonald 68k
2
votes
1
reply
164
views
Answer: Answer: Suppress warning in RHDF5 write
9 weeks ago James W. MacDonald 68k
0
votes
0
replies
297
views
Answer: Answer: Integration: Paired-end vs healthy single-end from a different source
9 weeks ago James W. MacDonald 68k
0
votes
1
reply
4.7k
views
Comment: Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
11 weeks ago James W. MacDonald 68k
0
votes
1
reply
4.7k
views
Comment: Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
11 weeks ago James W. MacDonald 68k
0
votes
1
reply
4.7k
views
Comment: Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
11 weeks ago James W. MacDonald 68k
0
votes
1
reply
4.7k
views
Comment: Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
11 weeks ago James W. MacDonald 68k
0
votes
1
reply
331
views
Answer: Answer: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
12 weeks ago James W. MacDonald 68k
0
votes
0
replies
331
views
Comment: Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
12 weeks ago James W. MacDonald 68k
0
votes
0
replies
181
views
Answer: Answer: Gatins Set error
3 months ago James W. MacDonald 68k
0
votes
0
replies
559
views
Comment: Comment: GO.db and others package Download failure
3 months ago James W. MacDonald 68k
0
votes
1
reply
559
views
Comment: Comment: GO.db and others package Download failure
3 months ago James W. MacDonald 68k
0
votes
1
reply
559
views
Comment: Comment: GO.db and others package Download failure
3 months ago James W. MacDonald 68k
0
votes
1
reply
559
views
Answer: Answer: GO.db and others package Download failure
3 months ago James W. MacDonald 68k
0
votes
0
replies
1.4k
views
Comment: Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
3 months ago James W. MacDonald 68k
0
votes
1
reply
1.4k
views
Comment: Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
3 months ago James W. MacDonald 68k
0
votes
0
replies
195
views
Answer: Answer: Differential motif analysis
3 months ago James W. MacDonald 68k
1
vote
0
replies
446
views
Comment: Comment: How to construct a BSgenome object from a custom genome assembly using BSgenomeF
3 months ago James W. MacDonald 68k
0
votes
1
reply
522
views
Comment: Comment: DESeq2 interactions
3 months ago James W. MacDonald 68k
0
votes
1
reply
293
views
Answer: Answer: readBam vs read_bam_insert_metrics
3 months ago James W. MacDonald 68k
0
votes
1
reply
446
views
Answer: Answer: How to construct a BSgenome object from a custom genome assembly using BSgenomeF
3 months ago James W. MacDonald 68k
1
vote
2
replies
395
views
Answer: Answer: ROAST compare results with complex design
4 months ago James W. MacDonald 68k
0
votes
0
replies
1.2k
views
Comment: Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
4 months ago James W. MacDonald 68k
0
votes
1
reply
1.2k
views
Comment: Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
4 months ago James W. MacDonald 68k
0
votes
0
replies
279
views
Answer: Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel
4 months ago James W. MacDonald 68k
2
votes
1
reply
1.2k
views
Answer: Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
4 months ago James W. MacDonald 68k
0
votes
0
replies
13k
views
Comment: Comment: Can NanoString data be analyzed using DESeq2?
4 months ago James W. MacDonald 68k
0
votes
0
replies
13k
views
Comment: Comment: Can NanoString data be analyzed using DESeq2?
4 months ago James W. MacDonald 68k
0
votes
1
reply
2.0k
views
Comment: Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
4 months ago James W. MacDonald 68k
0
votes
1
reply
720
views
Comment: Comment: Getting way too many DEGs with LRT for time-series RNA-seq!
4 months ago James W. MacDonald 68k
0
votes
1
reply
720
views
Comment: Comment: Getting way too many DEGs with LRT for time-series RNA-seq!
4 months ago James W. MacDonald 68k
0
votes
1
reply
720
views
Comment: Comment: Getting way too many DEGs with LRT for time-series RNA-seq!
4 months ago James W. MacDonald 68k
0
votes
1
reply
720
views
Comment: Comment: Getting way too many DEGs with LRT for time-series RNA-seq!
4 months ago James W. MacDonald 68k
0
votes
1
reply
720
views
Answer: Answer: Getting way too many DEGs with LRT for time-series RNA-seq!
4 months ago James W. MacDonald 68k
0
votes
0
replies
419
views
Comment: Comment: Create consensusMatrix for codon bases
4 months ago James W. MacDonald 68k
0
votes
0
replies
825
views
Comment: Comment: makeChipPackage(): Error in data.frame(..., check.names = FALSE) : arguments
4 months ago James W. MacDonald 68k
1
vote
1
reply
288
views
Answer: Answer: The default value of 'abundanceCol'
5 months ago James W. MacDonald 68k
1
vote
1
reply
825
views
Comment: Comment: makeChipPackage(): Error in data.frame(..., check.names = FALSE) : arguments
5 months ago James W. MacDonald 68k
2
votes
1
reply
825
views
Answer: Answer: makeChipPackage(): Error in data.frame(..., check.names = FALSE) : arguments
5 months ago James W. MacDonald 68k
0
votes
1
reply
825
views
Comment: Comment: makeChipPackage(): Error in data.frame(..., check.names = FALSE) : arguments
5 months ago James W. MacDonald 68k
0
votes
0
replies
232
views
Answer: Answer: muffz.plot2
5 months ago James W. MacDonald 68k
0
votes
0
replies
538
views
Comment: Comment: Feedback needed on new user-friendly BED file tool
5 months ago James W. MacDonald 68k
0
votes
2
replies
580
views
Answer: Answer: DEP R-package run_app ("TMT") spits this error: "Error: 'imputeMethods' is not a
5 months ago James W. MacDonald 68k
0
votes
0
replies
409
views
Comment: Comment: ORFik: spliced 5utr regions
5 months ago James W. MacDonald 68k
0
votes
0
replies
626
views
Answer: Answer: MEDIPS.meth gives table with NA rpkm values
5 months ago James W. MacDonald 68k
0
votes
0
replies
665
views
Answer: Answer: cytolib uses outdated boost call
5 months ago James W. MacDonald 68k
0
votes
0
replies
1.2k
views
Comment: Comment: Install old version of DESeq2
6 months ago James W. MacDonald 68k
8,870 results • Page 1 of 178
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6