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0
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120
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Answer:
Answer: Integration: Paired-end vs healthy single-end from a different source
2 days ago
James W. MacDonald
68k
0
votes
1
reply
4.5k
views
Comment:
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
12 days ago
James W. MacDonald
68k
0
votes
1
reply
4.5k
views
Comment:
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
15 days ago
James W. MacDonald
68k
0
votes
1
reply
4.5k
views
Comment:
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
15 days ago
James W. MacDonald
68k
0
votes
1
reply
4.5k
views
Comment:
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
16 days ago
James W. MacDonald
68k
0
votes
1
reply
220
views
Answer:
Answer: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
22 days ago
James W. MacDonald
68k
0
votes
0
replies
220
views
Comment:
Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
22 days ago
James W. MacDonald
68k
0
votes
0
replies
105
views
Answer:
Answer: Gatins Set error
4 weeks ago
James W. MacDonald
68k
0
votes
0
replies
395
views
Comment:
Comment: GO.db and others package Download failure
6 weeks ago
James W. MacDonald
68k
0
votes
1
reply
395
views
Comment:
Comment: GO.db and others package Download failure
6 weeks ago
James W. MacDonald
68k
0
votes
1
reply
395
views
Comment:
Comment: GO.db and others package Download failure
6 weeks ago
James W. MacDonald
68k
0
votes
1
reply
395
views
Answer:
Answer: GO.db and others package Download failure
7 weeks ago
James W. MacDonald
68k
0
votes
0
replies
1.1k
views
Comment:
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
7 weeks ago
James W. MacDonald
68k
0
votes
1
reply
1.1k
views
Comment:
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
7 weeks ago
James W. MacDonald
68k
0
votes
0
replies
114
views
Answer:
Answer: Differential motif analysis
7 weeks ago
James W. MacDonald
68k
1
vote
0
replies
349
views
Comment:
Comment: How to construct a BSgenome object from a custom genome assembly using BSgenomeF
7 weeks ago
James W. MacDonald
68k
0
votes
1
reply
379
views
Comment:
Comment: DESeq2 interactions
7 weeks ago
James W. MacDonald
68k
0
votes
1
reply
215
views
Answer:
Answer: readBam vs read_bam_insert_metrics
7 weeks ago
James W. MacDonald
68k
0
votes
1
reply
349
views
Answer:
Answer: How to construct a BSgenome object from a custom genome assembly using BSgenomeF
7 weeks ago
James W. MacDonald
68k
1
vote
2
replies
324
views
Answer:
Answer: ROAST compare results with complex design
9 weeks ago
James W. MacDonald
68k
0
votes
0
replies
1.0k
views
Comment:
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
9 weeks ago
James W. MacDonald
68k
0
votes
1
reply
1.0k
views
Comment:
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
9 weeks ago
James W. MacDonald
68k
0
votes
0
replies
204
views
Answer:
Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel
9 weeks ago
James W. MacDonald
68k
2
votes
1
reply
1.0k
views
Answer:
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
10 weeks ago
James W. MacDonald
68k
0
votes
0
replies
13k
views
Comment:
Comment: Can NanoString data be analyzed using DESeq2?
10 weeks ago
James W. MacDonald
68k
0
votes
0
replies
13k
views
Comment:
Comment: Can NanoString data be analyzed using DESeq2?
10 weeks ago
James W. MacDonald
68k
0
votes
1
reply
1.1k
views
Comment:
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
10 weeks ago
James W. MacDonald
68k
0
votes
1
reply
574
views
Comment:
Comment: Getting way too many DEGs with LRT for time-series RNA-seq!
11 weeks ago
James W. MacDonald
68k
0
votes
1
reply
574
views
Comment:
Comment: Getting way too many DEGs with LRT for time-series RNA-seq!
11 weeks ago
James W. MacDonald
68k
0
votes
1
reply
574
views
Comment:
Comment: Getting way too many DEGs with LRT for time-series RNA-seq!
11 weeks ago
James W. MacDonald
68k
0
votes
1
reply
574
views
Comment:
Comment: Getting way too many DEGs with LRT for time-series RNA-seq!
11 weeks ago
James W. MacDonald
68k
0
votes
1
reply
574
views
Answer:
Answer: Getting way too many DEGs with LRT for time-series RNA-seq!
11 weeks ago
James W. MacDonald
68k
0
votes
0
replies
241
views
Comment:
Comment: Create consensusMatrix for codon bases
11 weeks ago
James W. MacDonald
68k
0
votes
0
replies
669
views
Comment:
Comment: makeChipPackage(): Error in data.frame(..., check.names = FALSE) : arguments
12 weeks ago
James W. MacDonald
68k
1
vote
1
reply
238
views
Answer:
Answer: The default value of 'abundanceCol'
12 weeks ago
James W. MacDonald
68k
1
vote
1
reply
669
views
Comment:
Comment: makeChipPackage(): Error in data.frame(..., check.names = FALSE) : arguments
3 months ago
James W. MacDonald
68k
2
votes
1
reply
669
views
Answer:
Answer: makeChipPackage(): Error in data.frame(..., check.names = FALSE) : arguments
3 months ago
James W. MacDonald
68k
0
votes
1
reply
669
views
Comment:
Comment: makeChipPackage(): Error in data.frame(..., check.names = FALSE) : arguments
3 months ago
James W. MacDonald
68k
0
votes
0
replies
183
views
Answer:
Answer: muffz.plot2
3 months ago
James W. MacDonald
68k
0
votes
0
replies
346
views
Comment:
Comment: Feedback needed on new user-friendly BED file tool
3 months ago
James W. MacDonald
68k
0
votes
2
replies
532
views
Answer:
Answer: DEP R-package run_app ("TMT") spits this error: "Error: 'imputeMethods' is not a
3 months ago
James W. MacDonald
68k
0
votes
0
replies
248
views
Comment:
Comment: ORFik: spliced 5utr regions
3 months ago
James W. MacDonald
68k
0
votes
0
replies
580
views
Answer:
Answer: MEDIPS.meth gives table with NA rpkm values
3 months ago
James W. MacDonald
68k
0
votes
0
replies
613
views
Answer:
Answer: cytolib uses outdated boost call
3 months ago
James W. MacDonald
68k
0
votes
0
replies
937
views
Comment:
Comment: Install old version of DESeq2
3 months ago
James W. MacDonald
68k
0
votes
0
replies
501
views
Answer:
Answer: discrepancy in IDs from file and tx2gene (IDs don't match)
3 months ago
James W. MacDonald
68k
0
votes
0
replies
1.7k
views
Answer:
Answer: RNA-seq: TPM batch effect correction
4 months ago
James W. MacDonald
68k
1
vote
0
replies
5.1k
views
Comment:
Comment: Analysis of clusters of a heatmap with enrichGO of clusterProfiler: choice fo t
4 months ago
James W. MacDonald
68k
1
vote
1
reply
5.1k
views
Answer:
Answer: Analysis of clusters of a heatmap with enrichGO of clusterProfiler: choice fo t
4 months ago
James W. MacDonald
68k
0
votes
0
replies
1.1k
views
Answer:
Answer: TopGO question
4 months ago
James W. MacDonald
68k
8,865 results • Page
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