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Answer: Answer: Error: package or namespace load failed for ‘org.Hs.eg.db’:
1 day ago James W. MacDonald 56k
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Answer: Answer: Error: package or namespace load failed for ‘org.Mm.eg.db':
1 day ago James W. MacDonald 56k
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Answer: Answer: High fold change reported for comparison of samples with zero values in all samp
3 days ago James W. MacDonald 56k
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Answer: Answer: TargetsFile. Where it is?
4 days ago James W. MacDonald 56k
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51
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Answer: Answer: Query regarding edgeR and limma
4 days ago James W. MacDonald 56k
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82
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Comment: Comment: Gviz featureAnnotation disappear when zooming in
9 days ago James W. MacDonald 56k
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132
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Comment: Comment: EPIC array single replicate pipeline?
10 days ago James W. MacDonald 56k
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155
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Comment: Comment: Gene ID conversion for pathway enrichment analysis of differentially expressed g
10 days ago James W. MacDonald 56k
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86
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Answer: Answer: BSGenome Forge for non-model organism
11 days ago James W. MacDonald 56k
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132
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Comment: Comment: EPIC array single replicate pipeline?
11 days ago James W. MacDonald 56k
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132
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Comment: Comment: EPIC array single replicate pipeline?
11 days ago James W. MacDonald 56k
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132
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Answer: Answer: EPIC array single replicate pipeline?
12 days ago James W. MacDonald 56k
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82
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Answer: Answer: Gviz featureAnnotation disappear when zooming in
12 days ago James W. MacDonald 56k
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58
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Answer: Answer: Unable to use ensembldb's "ensDbFromGff()" function on .gff file from NCBI
12 days ago James W. MacDonald 56k
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0
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77
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Comment: Comment: How estimateDisp, glmQLFit and glmQLFTest process my TMM normalized read count m
13 days ago James W. MacDonald 56k
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225
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Comment: Comment: How to run Goseq for list of ensembl gene IDs
16 days ago James W. MacDonald 56k
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225
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Comment: Comment: How to run Goseq for list of ensembl gene IDs
16 days ago James W. MacDonald 56k
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147
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Answer: Answer: R session aborted: prcomp
17 days ago James W. MacDonald 56k
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46
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Answer: Answer: mean coverage plot of IRanges / Granges object
17 days ago James W. MacDonald 56k
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225
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Answer: Answer: How to run Goseq for list of ensembl gene IDs
18 days ago James W. MacDonald 56k
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1
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155
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Answer: Answer: Gene ID conversion for pathway enrichment analysis of differentially expressed g
19 days ago James W. MacDonald 56k
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55
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Answer: Answer: How to quantile normalize arraystar lncRNA microarray data?
19 days ago James W. MacDonald 56k
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225
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Comment: Comment: How to run Goseq for list of ensembl gene IDs
19 days ago James W. MacDonald 56k
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1
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225
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Comment: Comment: How to run Goseq for list of ensembl gene IDs
20 days ago James W. MacDonald 56k
2
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117
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Answer: Answer: Error in (function (classes, fdef, mtable) : unable to find an inherited met
23 days ago James W. MacDonald 56k
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67
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Answer: Answer: Setting up bioconductor on a Linux server using conda
23 days ago James W. MacDonald 56k
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928
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Comment: Comment: Map uniprot entry name to accession number
24 days ago James W. MacDonald 56k
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91
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Comment: Comment: DESeq2 - extracting results - Gnomon gene model
26 days ago James W. MacDonald 56k
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91
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Answer: Answer: DESeq2 - extracting results - Gnomon gene model
26 days ago James W. MacDonald 56k
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171
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Answer: Answer: How to add chr to an dba object before differential analysis to enable removing
26 days ago James W. MacDonald 56k
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0
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87
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Comment: Comment: Error when using org.Hs.eg.db package
27 days ago James W. MacDonald 56k
2
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1
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87
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Answer: Answer: Error when using org.Hs.eg.db package
27 days ago James W. MacDonald 56k
1
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1
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171
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Answer: Answer: How to add chr to an dba object before differential analysis to enable removing
4 weeks ago James W. MacDonald 56k
1
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0
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77
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Answer: Answer: BiomaRt conversion
4 weeks ago James W. MacDonald 56k
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89
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Answer: Answer: How to pick Illumina EPIC Array probe IDs within a specific genomic region?
4 weeks ago James W. MacDonald 56k
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118
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Comment: Comment: duplicate exonrank information in library("Homo.sapiens")
4 weeks ago James W. MacDonald 56k
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163
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Comment: Comment: how to make a contrast of uniquely DE genes
4 weeks ago James W. MacDonald 56k
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163
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Comment: Comment: how to make a contrast of uniquely DE genes
4 weeks ago James W. MacDonald 56k
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2
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163
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Answer: Answer: how to make a contrast of uniquely DE genes
4 weeks ago James W. MacDonald 56k
2
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1
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118
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Answer: Answer: duplicate exonrank information in library("Homo.sapiens")
4 weeks ago James W. MacDonald 56k
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66
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Answer: Answer: readVCF requires the argument "genome". What does it stand for?
4 weeks ago James W. MacDonald 56k
2
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177
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Answer: Answer: Discrepancy in effect size calculation between ordinary Cohens D and LIMMA
4 weeks ago James W. MacDonald 56k
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1
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81
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Answer: Answer: Getting list of genes enriched in each of Biological process terms
4 weeks ago James W. MacDonald 56k
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115
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Comment: Comment: annotaton hub will not load in R4.04 RStudio3.12
4 weeks ago James W. MacDonald 56k
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115
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Answer: Answer: annotaton hub will not load in R4.04 RStudio3.12
4 weeks ago James W. MacDonald 56k
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1
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76
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Answer: Answer: I am creating contrast matrix and i am following every procedure but still i don
4 weeks ago James W. MacDonald 56k
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115
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Comment: Comment: annotaton hub will not load in R4.04 RStudio3.12
4 weeks ago James W. MacDonald 56k
1
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1
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142
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Comment: Comment: How can I convert the "Majority protein IDs" to "Gene names" (example below show
4 weeks ago James W. MacDonald 56k
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97
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Comment: Comment: Visualising read alignments in
4 weeks ago James W. MacDonald 56k
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2
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142
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Comment: Comment: How can I convert the "Majority protein IDs" to "Gene names" (example below show
5 weeks ago James W. MacDonald 56k
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