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Answer: Answer: Unable to install DESeq2
14 months ago James W. MacDonald 67k
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901
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Comment: Comment: Questions Trying to Re-create MicroArray Data (GSE97562) (Fig. 2)
14 months ago James W. MacDonald 67k
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Answer: Answer: Trouble using biomaRt to pull pathway genes from GO
14 months ago James W. MacDonald 67k
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901
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Comment: Comment: Questions Trying to Re-create MicroArray Data (GSE97562) (Fig. 2)
14 months ago James W. MacDonald 67k
2
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901
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Answer: Answer: Questions Trying to Re-create MicroArray Data (GSE97562) (Fig. 2)
14 months ago James W. MacDonald 67k
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2
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1.5k
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Answer: Answer: Reading data into chromVAR
14 months ago James W. MacDonald 67k
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771
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Answer: Answer: DESeq2 LRT Reduced Formula
15 months ago James W. MacDonald 67k
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11k
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Comment: Comment: Getting rs ids using chr coordinates | Biomart
15 months ago James W. MacDonald 67k
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1.1k
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Comment: Comment: diffbind dba.count error "files could not be accessed" on windows 11
15 months ago James W. MacDonald 67k
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1.1k
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Answer: Answer: diffbind dba.count error "files could not be accessed" on windows 11
15 months ago James W. MacDonald 67k
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1.3k
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Answer: Answer: How to Load a Molecular Signature Database into clusterProfiler gseGO?
15 months ago James W. MacDonald 67k
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412
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Answer: Answer: Complex DESeq2 Experimental Design
15 months ago James W. MacDonald 67k
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964
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Comment: Comment: Multiple Testing When Using Multiple Contrasts/Comparisons in DESEQ2
15 months ago James W. MacDonald 67k
2
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520
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Answer: Answer: Running DEseq2 without "factor" gives unexpected results
15 months ago James W. MacDonald 67k
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1.2k
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Comment: Comment: Sample size estimation in R
15 months ago James W. MacDonald 67k
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1.2k
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Comment: Comment: Sample size estimation in R
15 months ago James W. MacDonald 67k
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1.2k
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Comment: Comment: Sample size estimation in R
15 months ago James W. MacDonald 67k
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1.2k
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Answer: Answer: Sample size estimation in R
15 months ago James W. MacDonald 67k
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2.8k
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Answer: Answer: extract rsids of SNPs using their genomic positions
15 months ago James W. MacDonald 67k
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1
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964
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Answer: Answer: Multiple Testing When Using Multiple Contrasts/Comparisons in DESEQ2
15 months ago James W. MacDonald 67k
2
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1.0k
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Answer: Answer: Using oligo or xps to read and convert RNA-seq data CEL file to txt file.
15 months ago James W. MacDonald 67k
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2
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1.8k
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Answer: Answer: DESeq2 test for synergistic vs additive effects
15 months ago James W. MacDonald 67k
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3
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1.6k
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Answer: Answer: Importing RSEM processed data already formatted as a summarized experiment into
15 months ago James W. MacDonald 67k
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951
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Comment: Comment: Pairwise differential expression using limma
15 months ago James W. MacDonald 67k
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2
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5.2k
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Answer: Answer: Error: Bioconductor version cannot be validated; no internet connection?
15 months ago James W. MacDonald 67k
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2
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951
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Answer: Answer: Pairwise differential expression using limma
15 months ago James W. MacDonald 67k
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0
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4.5k
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Comment: Comment: DESeq2: Extremely low pvalues
15 months ago James W. MacDonald 67k
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1
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1.4k
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Comment: Comment: Query regarding to create custom organism database with AnnotationForge package
15 months ago James W. MacDonald 67k
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1.4k
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Comment: Comment: Query regarding to create custom organism database with AnnotationForge package
15 months ago James W. MacDonald 67k
1
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1
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1.9k
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Comment: Comment: Choosing between VST and rlog for PCA for outlier identification in DESeq2 when
15 months ago James W. MacDonald 67k
2
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1.4k
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Answer: Answer: Query regarding to create custom organism database with AnnotationForge package
15 months ago James W. MacDonald 67k
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1
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1.9k
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Answer: Answer: Choosing between VST and rlog for PCA for outlier identification in DESeq2 when
15 months ago James W. MacDonald 67k
0
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0
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654
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Answer: Answer: SPIAT for HALO manual phenotype entry
15 months ago James W. MacDonald 67k
0
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1
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569
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Answer: Answer: Visualization of absolute values after batch effect correction
15 months ago James W. MacDonald 67k
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0
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1.4k
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Answer: Answer: How to make OPLS-DA variable importance plot
15 months ago James W. MacDonald 67k
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0
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601
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Answer: Answer: How to do PFS after Voom + Limma DGE ?
15 months ago James W. MacDonald 67k
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1.7k
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Comment: Comment: SD filtering before DEG analysis with limma : possible or not ?
15 months ago James W. MacDonald 67k
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0
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786
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Comment: Comment: limma paired design
15 months ago James W. MacDonald 67k
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1
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1.7k
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Comment: Comment: SD filtering before DEG analysis with limma : possible or not ?
15 months ago James W. MacDonald 67k
1
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2
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1.7k
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Comment: Comment: SD filtering before DEG analysis with limma : possible or not ?
15 months ago James W. MacDonald 67k
0
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1
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876
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Answer: Answer: bambu output
15 months ago James W. MacDonald 67k
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1
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1.7k
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Answer: Answer: SD filtering before DEG analysis with limma possible or not
15 months ago James W. MacDonald 67k
0
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1
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1.9k
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Comment: Comment: ranking the DeSeq2 results using t-values?
15 months ago James W. MacDonald 67k
0
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1
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1.9k
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Comment: Comment: ranking the DeSeq2 results using t-values?
15 months ago James W. MacDonald 67k
0
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1
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1.9k
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Comment: Comment: ranking the DeSeq2 results using t-values?
15 months ago James W. MacDonald 67k
0
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1
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1.9k
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Answer: Answer: ranking the DeSeq2 results using t-values?
15 months ago James W. MacDonald 67k
0
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0
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5.6k
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Comment: Comment: Cross-species RNA-seq with DESeq2
15 months ago James W. MacDonald 67k
0
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1
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942
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Answer: Answer: Get Intron Seq
15 months ago James W. MacDonald 67k
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0
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939
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Comment: Comment: Wondering how to look at the reads of a gene in samples to check if it was knock
15 months ago James W. MacDonald 67k
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1
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939
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Answer: Answer: Wondering how to look at the reads of a gene in samples to check if it was knock
15 months ago James W. MacDonald 67k
8,581 results • Page 16 of 172
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