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Answer:
Answer: Archives prior to 3.15 gone
2.0 years ago
James W. MacDonald
67k
0
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0
replies
719
views
Answer:
Answer: Annotation data packages for plant parasitic nematodes
2.0 years ago
James W. MacDonald
67k
0
votes
0
replies
1.7k
views
Comment:
Comment: How to annotate Data with oligo and Affymetrix HuGene-2_0-st package?
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.3k
views
Answer:
Answer: How to fix error in makeTxDbFromGFF() when using Gencode M30 (mouse)?
2.1 years ago
James W. MacDonald
67k
0
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0
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1.7k
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Comment:
Comment: How to annotate Data with oligo and Affymetrix HuGene-2_0-st package?
2.1 years ago
James W. MacDonald
67k
0
votes
2
replies
1.7k
views
Comment:
Comment: How to annotate Data with oligo and Affymetrix HuGene-2_0-st package?
2.1 years ago
James W. MacDonald
67k
1
vote
0
replies
1.7k
views
Answer:
Answer: How to annotate Data with oligo and Affymetrix HuGene-2_0-st package?
2.1 years ago
James W. MacDonald
67k
1
vote
1
reply
611
views
Answer:
Answer: Do we need to correct any of the data from DESeq2, if we only want to investigat
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
903
views
Answer:
Answer: How to add rowLinks, rowTree in SummarizedExperiment manually.
2.1 years ago
James W. MacDonald
67k
2
votes
1
reply
1.2k
views
Answer:
Answer: Error message from protein coding prediction with VariantAnnotation
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.2k
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Comment:
Comment: Error message from protein coding prediction with VariantAnnotation
2.1 years ago
James W. MacDonald
67k
1
vote
1
reply
1.4k
views
Answer:
Answer: QSEA: choose appropriate reference for TMM normalisation with qsea::addLibraryFa
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.5k
views
Comment:
Comment: Generate Heatmap from Gene Names after DESEQ2
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
743
views
Answer:
Answer: Missing a list of ensembl gene dataset for some species
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.5k
views
Answer:
Answer: Generate Heatmap from Gene Names after DESEQ2
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.3k
views
Comment:
Comment: Clarification about DESeq2 counts() function when dealing with covariates
2.1 years ago
James W. MacDonald
67k
1
vote
1
reply
1.3k
views
Answer:
Answer: Clarification about DESeq2 counts() function when dealing with covariates
2.1 years ago
James W. MacDonald
67k
1
vote
0
replies
1.1k
views
Comment:
Comment: rtacklayer::import.bed silently adds 1 to the start coordinates
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.1k
views
Answer:
Answer: rtacklayer::import.bed silently adds 1 to the start coordinates
2.1 years ago
James W. MacDonald
67k
1
vote
0
replies
1.7k
views
Comment:
Comment: difference between txi$counts and txi$abundance when countsFromAbundance is true
2.1 years ago
James W. MacDonald
67k
1
vote
0
replies
982
views
Answer:
Answer: Gene abundance DESEq
2.1 years ago
James W. MacDonald
67k
1
vote
1
reply
1.7k
views
Answer:
Answer: difference between txi$counts and txi$abundance when countsFromAbundance is true
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
725
views
Answer:
Answer: Trying to understand the `select` option in `annotatePeakInBatch` function of `C
2.1 years ago
James W. MacDonald
67k
2
votes
1
reply
3.0k
views
Answer:
Answer: biomaRt finding transcript lenghts
2.1 years ago
James W. MacDonald
67k
0
votes
2
replies
4.1k
views
Comment:
Comment: NCBI Locus ID to gene ID conversion
2.1 years ago
James W. MacDonald
67k
2
votes
1
reply
1.8k
views
Answer:
Answer: Merge GRanges, ignore strand
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.1k
views
Answer:
Answer: Stringtie reads to deseq2
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
4.1k
views
Answer:
Answer: NCBI Locus ID to gene ID conversion
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.8k
views
Comment:
Comment: Merge GRanges, ignore strand
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
657
views
Answer:
Answer: Finding negative control in the array using R
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.4k
views
Answer:
Answer: Error in .testForValidKeys(x, keys, keytype, fks) :
2.1 years ago
James W. MacDonald
67k
2
votes
1
reply
955
views
Answer:
Answer: [BigWigFile] import as RLE vs default and length comparaison
2.1 years ago
James W. MacDonald
67k
1
vote
1
reply
2.6k
views
Answer:
Answer: multiple voom runs with duplicateCorrelation and negative values in limma
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
16k
views
Comment:
Comment: hclust(d, method = method) : NA/NaN/Inf in foreign function call (arg 10)
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.4k
views
Comment:
Comment: Installing EnsDb.Hsapiens.v75 or other versions on Mac (M2)
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.4k
views
Answer:
Answer: Installing EnsDb.Hsapiens.v75 or other versions on Mac (M2)
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
3.8k
views
Comment:
Comment: how to color specific node or gene symbol from cnetplot ?
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
711
views
Answer:
Answer: Error in forging Casuarina genome in BSgenome Package
2.1 years ago
James W. MacDonald
67k
1
vote
0
replies
1.1k
views
Answer:
Answer: Error when trying to run uniport.ws ?
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.2k
views
Answer:
Answer: Density Plot using Noob Normalisation vs Quantile Normalisation
2.1 years ago
James W. MacDonald
67k
0
votes
2
replies
3.0k
views
Comment:
Comment: pathview says my nonmodel species is unknown: "species invalid"
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
3.0k
views
Comment:
Comment: pathview says my nonmodel species is unknown: "species invalid"
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
3.0k
views
Answer:
Answer: pathview says my nonmodel species is unknown: "species invalid"
2.1 years ago
James W. MacDonald
67k
2
votes
0
replies
1.7k
views
Answer:
Answer: Unable to download supplementary files from GSE146963 using GEOquery
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.2k
views
Comment:
Comment: errors in annotation
2.1 years ago
James W. MacDonald
67k
0
votes
2
replies
1.2k
views
Comment:
Comment: errors in annotation
2.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.1k
views
Answer:
Answer: Problem related to `biomaRt::getBM()` during `R CMD check` execution
2.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.2k
views
Comment:
Comment: errors in annotation
2.1 years ago
James W. MacDonald
67k
3
votes
2
replies
5.5k
views
Answer:
Answer: Conversion of UniProt to Ensembl
2.1 years ago
James W. MacDonald
67k
2
votes
1
reply
1.3k
views
Answer:
Answer: the difference between getGEO and getGEOSuppFiles
2.1 years ago
James W. MacDonald
67k
8,582 results • Page
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