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1.2k
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Answer: A: <N/A> Gene Ontology while using the AnnotationDbi package
4.5 years ago James W. MacDonald 67k
0
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1
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2.3k
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Answer: A: Error in martCheck(mart, c("ensembl", "ENSEMBL_MART_ENSEMBL")) : No dataset s
4.5 years ago James W. MacDonald 67k
2
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0
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2.0k
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Answer: A: Error "cannot map the following UCSC seqlevel(s) to an NCBI seqlevel" in package
4.5 years ago James W. MacDonald 67k
1
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1
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881
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Comment: C: mean log2CPM after model fit (lmFit)
4.5 years ago James W. MacDonald 67k
2
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1
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881
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Answer: A: mean log2CPM after model fit (lmFit)
4.5 years ago James W. MacDonald 67k
0
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1
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2.0k
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Answer: A: rtracklayer::import() BigWig issue on windows
4.5 years ago James W. MacDonald 67k
0
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0
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889
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Answer: A: Does biovizBase contain a genesymbol data set for other model organisms?
4.5 years ago James W. MacDonald 67k
2
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0
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839
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Answer: A: Should I use factors for covariate in limma design matrix or not?
4.5 years ago James W. MacDonald 67k
1
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1
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1.3k
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Comment: C: 'NA' found under Gene Names in the list of top differentially expressed genes fo
4.5 years ago James W. MacDonald 67k
2
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2
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1.3k
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Comment: C: 'NA' found under Gene Names in the list of top differentially expressed genes fo
4.5 years ago James W. MacDonald 67k
0
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0
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715
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Answer: A: Trying to access the source repository of a bioconductor package (Developer Acce
4.5 years ago James W. MacDonald 67k
1
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1
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2.1k
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Answer: A: paired and unpaired test at the same time with voom limma
4.5 years ago James W. MacDonald 67k
0
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1
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1.2k
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Comment: C: Information on genomic sequences via Seqinfo failing
4.5 years ago James W. MacDonald 67k
0
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0
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727
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Comment: C: BiSeq - betaResults output only contains chr1 and chr2
4.5 years ago James W. MacDonald 67k
2
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1
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682
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Answer: A: Input files available for gwasurvivr vignette?
4.5 years ago James W. MacDonald 67k
1
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0
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1.4k
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Comment: C: Annotation issue while analyzing processed Affymetrix Human Exon 1.0 ST Arrays f
4.5 years ago James W. MacDonald 67k
1
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1
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576
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Answer: A: "Blocking" in design matrix prior to limma DE analysis
4.5 years ago James W. MacDonald 67k
2
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1
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1.4k
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Answer: A: Annotation issue while analyzing processed Affymetrix Human Exon 1.0 ST Arrays f
4.5 years ago James W. MacDonald 67k
0
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1
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10k
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Comment: C: BioMart: curl option when using getBM in loop
4.5 years ago James W. MacDonald 67k
0
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1
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1.1k
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Comment: C: remove background color from dba.plotVolcano (Diffbind)
4.6 years ago James W. MacDonald 67k
0
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0
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1.1k
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Comment: C: Estimate cell proportion from beta values using minfi estimateCellCounts?
4.6 years ago James W. MacDonald 67k
1
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1
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1.1k
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Answer: A: remove background color from dba.plotVolcano (Diffbind)
4.6 years ago James W. MacDonald 67k
0
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0
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2.4k
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Answer: A: Installation Path Not Writeable
4.6 years ago James W. MacDonald 67k
0
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1
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10k
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Answer: A: BioMart: curl option when using getBM in loop
4.6 years ago James W. MacDonald 67k
1
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0
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1.9k
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Comment: C: Issues loading a BAM file resulted from featurecounts
4.6 years ago James W. MacDonald 67k
2
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1
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1.4k
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Answer: A: Specific KEGG.db pathways not found in KEGG.db package
4.6 years ago James W. MacDonald 67k
0
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0
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1.4k
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Answer: A: get Gene ID from GEO microarray dataset with fData
4.6 years ago James W. MacDonald 67k
1
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1
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1.5k
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Answer: A: Gene Ontology analysis
4.6 years ago James W. MacDonald 67k
0
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1
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1.7k
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Comment: C: negative one "-1" values in index files using Rsubread
4.6 years ago James W. MacDonald 67k
0
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1
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1.7k
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Comment: C: negative one "-1" values in index files using Rsubread
4.6 years ago James W. MacDonald 67k
0
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1
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1.7k
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Comment: C: negative one "-1" values in index files using Rsubread
4.6 years ago James W. MacDonald 67k
0
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0
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3.9k
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Comment: C: How to get list of all GOIDs with all genes in each GO term?
4.6 years ago James W. MacDonald 67k
0
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1
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3.9k
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Comment: C: How to get list of all GOIDs with all genes in each GO term?
4.6 years ago James W. MacDonald 67k
2
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1
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3.9k
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Answer: A: How to get list of all GOIDs with all genes in each GO term?
4.6 years ago James W. MacDonald 67k
1
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0
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1.1k
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Answer: A: Trouble using affy library
4.6 years ago James W. MacDonald 67k
0
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1
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1.3k
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Comment: C: Remove batch effect for DESeq2
4.6 years ago James W. MacDonald 67k
0
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1
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1.3k
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Comment: C: Remove batch effect for DESeq2
4.6 years ago James W. MacDonald 67k
0
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2
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1.3k
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Answer: A: Remove batch effect for DESeq2
4.6 years ago James W. MacDonald 67k
1
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0
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1.2k
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Answer: A: Joint pathway Analysis using both gene and metabolite data sets
4.6 years ago James W. MacDonald 67k
0
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0
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428
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Answer: A: Unable to subseq the quality on fastq
4.6 years ago James W. MacDonald 67k
1
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1
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692
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Answer: A: adding gene names with biomaRt hgnc_symbol column <logical> with NA
4.6 years ago James W. MacDonald 67k
0
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0
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1.1k
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Answer: A: Adjusting for unwanted variation in DESeq2
4.6 years ago James W. MacDonald 67k
0
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0
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301
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Answer: A: affyQCreport ISSUE OF VECTOR ALLOCATION ERROR..
4.6 years ago James W. MacDonald 67k
2
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1
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2.1k
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Comment: C: Problem with installing packages made by makeOrgPackageFromNCBI
4.6 years ago James W. MacDonald 67k
0
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0
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604
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Comment: C: R studio abort using rgraphviz when using node labels
4.6 years ago James W. MacDonald 67k
1
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1
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2.1k
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Answer: A: Problem with installing packages made by makeOrgPackageFromNCBI
4.6 years ago James W. MacDonald 67k
0
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1
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983
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Comment: C: Extract the relevant information of the genes sets from the Bioconductor annotat
4.6 years ago James W. MacDonald 67k
1
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1
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983
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Answer: A: Extract the relevant information of the genes sets from the Bioconductor annotat
4.6 years ago James W. MacDonald 67k
0
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0
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2.0k
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Comment: C: Problem installing annotation packages AnnotationDbi & BiocFileCache
4.6 years ago James W. MacDonald 67k
0
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1
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2.4k
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Comment: C: rtracklayer: error in importing bigwig file in r in windows
4.6 years ago James W. MacDonald 67k
8,589 results • Page 49 of 172
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