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514
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Comment: Comment: DEXSeq: summarizeOverlaps() crashes Rstudio with too many samples
4 months ago James W. MacDonald 66k
2
votes
1
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437
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Answer: Answer: ComplexHeatmap crashing R session
4 months ago James W. MacDonald 66k
1
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0
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445
views
Comment: Comment: TMM normalization after RUVg correction
4 months ago James W. MacDonald 66k
0
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0
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611
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Comment: Comment: Need help generating BSgenome and orgdb
4 months ago James W. MacDonald 66k
1
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1
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445
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Answer: Answer: TMM normalization after RUVg correction
4 months ago James W. MacDonald 66k
2
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0
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344
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Answer: Answer: Need Help w/ Subset on GRangesList
4 months ago James W. MacDonald 66k
0
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1
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1.1k
views
Comment: Comment: Error MakeOrgPackagefromNCBI
4 months ago James W. MacDonald 66k
0
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1
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459
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Comment: Comment: DNABarcodes-Installation Issue
4 months ago James W. MacDonald 66k
0
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1
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500
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Answer: Answer: LOG2FC DESEQ2
4 months ago James W. MacDonald 66k
1
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1
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514
views
Answer: Answer: DEXSeq: summarizeOverlaps() crashes Rstudio with too many samples
4 months ago James W. MacDonald 66k
0
votes
1
reply
459
views
Answer: Answer: DNABarcodes-Installation Issue
4 months ago James W. MacDonald 66k
0
votes
1
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503
views
Comment: Comment: Ballgown error in scan for c.tab files
4 months ago James W. MacDonald 66k
2
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1
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1.5k
views
Comment: Comment: Packages don't update, but no error or warning is thrown
4 months ago James W. MacDonald 66k
0
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1
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1.5k
views
Comment: Comment: Packages don't update, but no error or warning is thrown
4 months ago James W. MacDonald 66k
0
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0
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222
views
Answer: Answer: How to control RAN-seq samples from different libraries
4 months ago James W. MacDonald 66k
0
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1
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503
views
Answer: Answer: Ballgown error in scan for c.tab files
4 months ago James W. MacDonald 66k
0
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1
reply
1.5k
views
Comment: Comment: Packages don't update, but no error or warning is thrown
4 months ago James W. MacDonald 66k
0
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0
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1.1k
views
Comment: Comment: biomaRt has encountered an unknown server error.
5 months ago James W. MacDonald 66k
1
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1
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1.1k
views
Comment: Comment: biomaRt has encountered an unknown server error.
5 months ago James W. MacDonald 66k
2
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2
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1.1k
views
Answer: Answer: biomaRt has encountered an unknown server error.
5 months ago James W. MacDonald 66k
2
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0
replies
496
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Comment: Comment: edgeR - Design matrix for comparisons of all and subsets of samples
5 months ago James W. MacDonald 66k
1
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0
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306
views
Answer: Answer: Question about correction of confounders for EWAS
5 months ago James W. MacDonald 66k
0
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0
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631
views
Comment: Comment: GO enrichment analysis does not show any pathways in my case
5 months ago James W. MacDonald 66k
0
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1
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631
views
Answer: Answer: GO enrichment analysis does not show any pathways in my case
5 months ago James W. MacDonald 66k
1
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0
replies
661
views
Comment: Comment: edgeR error "Design matrix not of full rank"
updated 5 months ago by 51k • written 5 months ago by 66k
2
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0
replies
673
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Comment: Comment: readDGE in edgeR giving me path names as sample names
5 months ago James W. MacDonald 66k
1
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0
replies
673
views
Comment: Comment: readDGE in edgeR giving me path names as sample names
5 months ago James W. MacDonald 66k
1
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2
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673
views
Answer: Answer: readDGE in edgeR giving me path names as sample names
5 months ago James W. MacDonald 66k
0
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1
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335
views
Answer: Answer: ConsensusClusterPlus dosesn't make an output file
5 months ago James W. MacDonald 66k
0
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1
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661
views
Comment: Comment: edgeR error "Design matrix not of full rank"
5 months ago James W. MacDonald 66k
1
vote
2
replies
692
views
Answer: Answer: Comparing relative expression of a conserved gene between distantly related spec
5 months ago James W. MacDonald 66k
0
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1
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661
views
Comment: Comment: edgeR error "Design matrix not of full rank"
5 months ago James W. MacDonald 66k
2
votes
0
replies
509
views
Answer: Answer: When should I correct for batch effects
5 months ago James W. MacDonald 66k
0
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0
replies
433
views
Answer: Answer: ClusterProfiler result question: Why are all many of my resulting p.adjust value
5 months ago James W. MacDonald 66k
0
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0
replies
327
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Answer: Answer: visualizing GSEA showCategory question
5 months ago James W. MacDonald 66k
0
votes
0
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297
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Answer: Answer: Dimensionality reduction visualization
5 months ago James W. MacDonald 66k
1
vote
0
replies
671
views
Comment: Comment: Merging of Human and Mouse SingleCellExperiment Objects Error
5 months ago James W. MacDonald 66k
2
votes
1
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671
views
Answer: Answer: Merging of Human and Mouse SingleCellExperiment Objects Error
5 months ago James W. MacDonald 66k
0
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1
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943
views
Comment: Comment: Unable to locate BioMart dataset for Dog10K_Boxer_Tasha
5 months ago James W. MacDonald 66k
0
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1
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943
views
Comment: Comment: Unable to locate BioMart dataset for Dog10K_Boxer_Tasha
5 months ago James W. MacDonald 66k
1
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0
replies
1.3k
views
Comment: Comment: Problem installing package, version of dependency issue
5 months ago James W. MacDonald 66k
0
votes
1
reply
1.3k
views
Comment: Comment: Problem installing package, version of dependency issue
5 months ago James W. MacDonald 66k
0
votes
1
reply
1.3k
views
Comment: Comment: Problem installing package, version of dependency issue
5 months ago James W. MacDonald 66k
0
votes
1
reply
1.3k
views
Comment: Comment: Problem installing package, version of dependency issue
5 months ago James W. MacDonald 66k
0
votes
1
reply
1.3k
views
Answer: Answer: Problem installing package, version of dependency issue
5 months ago James W. MacDonald 66k
0
votes
0
replies
281
views
Answer: Answer: [DESEQ2] When to average biological replicates for hierarchical clustering
5 months ago James W. MacDonald 66k
2
votes
1
reply
364
views
Answer: Answer: How to interpret log2fold values when using numeric contrasts in DESEQ2?
5 months ago James W. MacDonald 66k
2
votes
0
replies
7.5k
views
Comment: Comment: Normalised counts from RUVg in RUVSeq
5 months ago James W. MacDonald 66k
3
votes
0
replies
481
views
Answer: Answer: Enrichement with clusterProfiler and biomart
5 months ago James W. MacDonald 66k
1
vote
0
replies
404
views
Comment: Comment: makeOrgPackageFromNCBI generates an empty database?
5 months ago James W. MacDonald 66k
8,454 results • Page 6 of 170
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