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following contributors:
9 years, 10 months ago
WEHI, Melbourne, Australia
edgeR and DESeq2: model design and estimation of dispersion
9 years, 11 months ago
WEHI, Melbourne, Australia
Gene expression analysis with edgeR with a large, nested design matrix
10 years ago
WEHI, Melbourne, Australia
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
10 years, 1 month ago
WEHI, Melbourne, Australia
queries re Voom + Limma for RNA-seq data
10 years, 1 month ago
WEHI, Melbourne, Australia
Handingly outliers with voom [was: tagwise parameters for negative binomial in edgeR]
10 years, 3 months ago
WEHI, Melbourne, Australia
Identifying genes that contribute to limma's roast/romer gene set enrichments
10 years, 3 months ago
WEHI, Melbourne, Australia
GLM common and trended dispersion EdgeR
10 years, 4 months ago
WEHI, Melbourne, Australia
EdgeR Design matrix not of full rank. The following coefficients not estimable errorR
10 years, 4 months ago
WEHI, Melbourne, Australia
EdgeR Design matrix not of full rank. The following coefficients not estimable errorR
10 years, 5 months ago
WEHI, Melbourne, Australia
easyRNASeq packages: overlapping exons warning unsolved (?) and use of paired end information
10 years, 5 months ago
WEHI, Melbourne, Australia
question about design for limma time course, 2 conditions and drug treatment microarray experiment
10 years, 6 months ago
WEHI, Melbourne, Australia
Problem with topTable function (after Bioconductor update)
10 years, 6 months ago
WEHI, Melbourne, Australia
enrichment packages that accept t-stat (or related stat) as input
10 years, 8 months ago
WEHI, Melbourne, Australia
Can I input ordinal variables into a model in Limma?
10 years, 8 months ago
WEHI, Melbourne, Australia
Complex Limma design: technical replication, biological replication and repeated experiment
10 years, 10 months ago
WEHI, Melbourne, Australia
edgeR: very low p-value and very high variance within the group of replicates
10 years, 11 months ago
WEHI, Melbourne, Australia
Differential expression testing for groups with unequal variances/dispersions?
10 years, 11 months ago
WEHI, Melbourne, Australia
How do I background correct an Illumina eset without using lumiB
10 years, 11 months ago
WEHI, Melbourne, Australia
problem with contrast.matrix and eBayes in limma
10 years, 12 months ago
WEHI, Melbourne, Australia
Combining differential gene expression on 2 reference transcriptomes: EdgeR analysis
10 years, 12 months ago
WEHI, Melbourne, Australia
calcNormFactors in edgeR - quick question from a very inexperienced user
11 years ago
WEHI, Melbourne, Australia
edgeR: Using ratios (translational efficiencies) as input
11 years, 2 months ago
WEHI, Melbourne, Australia
Limma: difficulties making multiple comparisons within one multiple-group model
11 years, 2 months ago
WEHI, Melbourne, Australia
AgiMicroRna for new Agilent Chip format
11 years, 2 months ago
WEHI, Melbourne, Australia
using offsets from EDASeq and cqn for edgeR
11 years, 5 months ago
WEHI, Melbourne, Australia
Equivalent of contrasts.fit & multi-contrast decideTests for edgeR?
11 years, 5 months ago
WEHI, Melbourne, Australia
Help interpreting many contrasts in one contrast versus many individual contrast matrices
11 years, 5 months ago
WEHI, Melbourne, Australia
How to design matrix on edgeR to study genotype x environmental interaction
11 years, 6 months ago
WEHI, Melbourne, Australia
limma topTable doesn't work without replicates [was: Help with limma]
11 years, 6 months ago
WEHI, Melbourne, Australia
limma topTable doesn't work without replicates [was: Help with limma]
11 years, 7 months ago
WEHI, Melbourne, Australia
Mentored Projects at Bioconductor
11 years, 8 months ago
WEHI, Melbourne, Australia
Limma normalization error and loess.R segmentation type fault (windows)
11 years, 8 months ago
WEHI, Melbourne, Australia
Variance stabilization of m-values
11 years, 10 months ago
WEHI, Melbourne, Australia
edgeR and tagwise dispersion: overcorrection for multiple tests?
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