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14 years, 8 months ago
WEHI, Melbourne, Australia
problems with estimateGLMTrendedDisp()
14 years, 8 months ago
WEHI, Melbourne, Australia
RNA-Seq with multiple factors [was Informations about DESeq package]
14 years, 9 months ago
WEHI, Melbourne, Australia
how to do paired t-tests for multiple subgroups [was: warnings or potential problems in limma procedure]
14 years, 9 months ago
WEHI, Melbourne, Australia
warnings or potential problems in limma procedure
14 years, 9 months ago
WEHI, Melbourne, Australia
limma design problem with a two color dataset
14 years, 10 months ago
WEHI, Melbourne, Australia
GLMs in DESeq (convergence problems)
14 years, 10 months ago
WEHI, Melbourne, Australia
RNASeq, differential expression between group, and large variance within groups
14 years, 10 months ago
WEHI, Melbourne, Australia
Distribution of negative controls on Illumina HT12-v4 chips
14 years, 10 months ago
WEHI, Melbourne, Australia
intraspotCorrelation vs duplicateCorrelation
14 years, 10 months ago
WEHI, Melbourne, Australia
LIMMA package differentially expressed genes
14 years, 11 months ago
WEHI, Melbourne, Australia
Single nucleotide based RNAseq normalization with edgeR
14 years, 11 months ago
WEHI, Melbourne, Australia
limma Within Array Normalisation By Controls
15 years, 1 month ago
WEHI, Melbourne, Australia
4 main questions about making complicated model matrix and fitting the model
15 years, 1 month ago
WEHI, Melbourne, Australia
EdgeR - problems running estimateCRDisp
15 years, 2 months ago
WEHI, Melbourne, Australia
edgeR and FDR values always equals 1
15 years, 2 months ago
WEHI, Melbourne, Australia
Limma time series analysis question
15 years, 2 months ago
WEHI, Melbourne, Australia
Questions about model matrix, logFC and adjusted P.value of t-test
15 years, 2 months ago
WEHI, Melbourne, Australia
Discrepancy in differential expression gene list after intraspot correlation
15 years, 3 months ago
WEHI, Melbourne, Australia
Question: How does limma derives its logFC value in two colored arrays?
15 years, 3 months ago
WEHI, Melbourne, Australia
unbalanced block design using limma
15 years, 4 months ago
WEHI, Melbourne, Australia
Limma script - Opinions requested
15 years, 5 months ago
WEHI, Melbourne, Australia
how does limma calculate the coefficients with using different design matrix?
15 years, 6 months ago
WEHI, Melbourne, Australia
Clustering RNA-seq profiles and DE analysis using edgeR
15 years, 6 months ago
WEHI, Melbourne, Australia
Clustering RNA-seq profiles using edgeR
15 years, 6 months ago
WEHI, Melbourne, Australia
limma matrix design for biological replicates.
15 years, 7 months ago
WEHI, Melbourne, Australia
Using Limma for peptide array analysis - technical replicate issues and false positives
15 years, 7 months ago
WEHI, Melbourne, Australia
limma, duplicateCorrelation, dupfit$consensus = 1
15 years, 8 months ago
WEHI, Melbourne, Australia
Romer warning serious? and nrot=9999?
15 years, 8 months ago
WEHI, Melbourne, Australia
edgeR: common vs tagwise dispersion
15 years, 9 months ago
WEHI, Melbourne, Australia
Limma: technical replicates in multi-group design
15 years, 9 months ago
WEHI, Melbourne, Australia
limma lmFit error: Coefficients not estimable
15 years, 9 months ago
WEHI, Melbourne, Australia
Calculation of $stdev.unscaled and $sigma values by lmfit() in Limma package
15 years, 10 months ago
WEHI, Melbourne, Australia
MArray into data.frame for SPIA package
15 years, 10 months ago
WEHI, Melbourne, Australia
Loop design - biological, technical replication and contrasts
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