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Matthew Thornton ▴ 380
1 year, 9 months ago
USA, Los Angeles, USC
GOstats - subsetting termGraphs with terms from the html report and missing nodes
Matthew Thornton ▴ 380
2 years ago
USA, Los Angeles, USC
DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FUN(X[[i]], ...) : subscript out of bounds" (DEXSeqDataSetFromHTSeq)
Matthew Thornton ▴ 380
2 years, 9 months ago
USA, Los Angeles, USC
ensembldb to make the EnsDb for Human Version 105 using 'fetchTablesFromEnsembl' I'm on day two, can it be sped up?
Matthew Thornton ▴ 380
3 years, 4 months ago
USA, Los Angeles, USC
Processing Nanostring GeoMX Q3 normalized data as intensities with Limma
Matthew Thornton ▴ 380
5 years, 7 months ago
USA, Los Angeles, USC
Exporting graphNEL into Cytoscape using RCy3 fails with 'arguments imply differing number of rows'
Matthew Thornton ▴ 380
5 years, 8 months ago
USA, Los Angeles, USC
Combining and using 10x Genomics output in SingleCellExperiment Objects
Matthew Thornton ▴ 380
5 years, 8 months ago
USA, Los Angeles, USC
Segmentation Fault with development versions of R, Bioconductor, and DropletUtils when processing output of CellRanger 3.0.2
Matthew Thornton ▴ 380
5 years, 8 months ago
USA, Los Angeles, USC
Error importing molecule_info.h5 file generated by Cell Ranger 3.0.2 into DropletUtils
Matthew Thornton ▴ 380
5 years, 9 months ago
USA, Los Angeles, USC
What are the methods to get count data per cell from single cell fastq given only R1, R2, and I1 fastq files
Matthew Thornton ▴ 380
6 years, 7 months ago
USA, Los Angeles, USC
Importing RMA processed data into limma for eBayes
Matthew Thornton ▴ 380
6 years, 7 months ago
USA, Los Angeles, USC
Potential bug in package("rtracklayer") undefined symbol regcompA
Matthew Thornton ▴ 380
6 years, 7 months ago
USA, Los Angeles, USC
Bioconductor Digest, Vol 121, Issue 13
Matthew Thornton ▴ 380
6 years, 8 months ago
USA, Los Angeles, USC
Annotation of DEXSeqHTML with biomaRt
Matthew Thornton ▴ 380
8 years, 1 month ago
USA, Los Angeles, USC
Importing RMA processed data into limma for eBayes
Matthew Thornton ▴ 380
8 years, 1 month ago
USA, Los Angeles, USC
What is the easiest way to make the GC content and length matrix for package cqn?
Matthew Thornton ▴ 380
8 years, 1 month ago
USA, Los Angeles, USC
Figuring out what long decent Phred value unaligned reads are
Matthew Thornton ▴ 380
10 years, 4 months ago
USA, Los Angeles, USC
xps - error in normalize - "Error: Length of non-varying units is zero."
Matthew Thornton ▴ 380
10 years, 4 months ago
USA, Los Angeles, USC
Limma design and contrast matrix question.
Matthew Thornton ▴ 380
10 years, 5 months ago
USA, Los Angeles, USC
External RNA controls on Rat Gene ST 2.0 chip lfc ~ 1 after xps rma??
Matthew Thornton ▴ 380
10 years, 5 months ago
USA, Los Angeles, USC
VSN with spike-in probes question
Matthew Thornton ▴ 380
10 years, 9 months ago
USA, Los Angeles, USC
VSN after xps with RaGene2.0ST chips - is there a way to keep an identifier?
Matthew Thornton ▴ 380
10 years, 9 months ago
USA, Los Angeles, USC
Is there an expected coefficient of variation for the hybridization probe intensities among technical replicates?
Matthew Thornton ▴ 380
10 years, 11 months ago
USA, Los Angeles, USC
Statistics questions regarding the use of Ambion ExFold ERCC standards with Affmetrix ST arrays.
Matthew Thornton ▴ 380
11 years, 8 months ago
USA, Los Angeles, USC
Bioconductor Digest, Vol 121, Issue 29
Matthew Thornton ▴ 380
11 years, 9 months ago
USA, Los Angeles, USC
I was wondering if anyone here was using SPP?
Matthew Thornton ▴ 380
11 years, 10 months ago
USA, Los Angeles, USC
Bioconductor Digest, Vol 120, Issue 12
Matthew Thornton ▴ 380
12 years ago
USA, Los Angeles, USC
Normalizing affymetrix chips with ERCC
Matthew Thornton ▴ 380
12 years, 1 month ago
USA, Los Angeles, USC
Normalization of Affymetrix microarray data with spike-in hybridization controls?
Matthew Thornton ▴ 380
12 years, 1 month ago
USA, Los Angeles, USC
Simpleaffy error : No methods found in "Biobase" for requests: geneNames
Matthew Thornton ▴ 380
12 years, 2 months ago
USA, Los Angeles, USC
library(simpleaffy) error
30 results • Page 1 of 1
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