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Created An Answer That Has Been Accepted
Awarded 5099 times (see all awards). Earned by the
following contributors:
9 years, 7 months ago
WEHI, Melbourne, Australia
Fit a multinomial to RNA-seq count data
9 years, 7 months ago
WEHI, Melbourne, Australia
Problem obtaining standard error from limma
9 years, 7 months ago
WEHI, Melbourne, Australia
Where is the source code for qAbundanceDist?
9 years, 7 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 7 months ago
WEHI, Melbourne, Australia
Getting genes list associated to current GO terms
9 years, 7 months ago
WEHI, Melbourne, Australia
GenomicAlignments is too slow with summarizeOverlaps
9 years, 7 months ago
WEHI, Melbourne, Australia
Combining data from multiple illumina microarray experiments
9 years, 7 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
9 years, 7 months ago
WEHI, Melbourne, Australia
In limma's barcode plot, why are the cutoffs for the pale red and blue bands +/-sqrt(2)?
9 years, 7 months ago
WEHI, Melbourne, Australia
Effect size similar to Cohen's d in limma
9 years, 7 months ago
WEHI, Melbourne, Australia
how to export data as excel file from plotSmear when using edgeR
9 years, 7 months ago
WEHI, Melbourne, Australia
Counting ambiguously mapped reads per feature
9 years, 7 months ago
WEHI, Melbourne, Australia
Calculating a p value by permutation analysis
9 years, 7 months ago
WEHI, Melbourne, Australia
Effects of continuous variable with adjustment for gender
9 years, 7 months ago
WEHI, Melbourne, Australia
Question about genas function in the limma package
9 years, 7 months ago
WEHI, Melbourne, Australia
limma; Only fit list of certain genes/ filter eSet
9 years, 7 months ago
WEHI, Melbourne, Australia
seeking a paper or journal review about repeated multiple testing for Biological ChIP-seq replicates?
9 years, 7 months ago
WEHI, Melbourne, Australia
how to use "non-standard" species for KEGG / GO analysis in limma?
9 years, 7 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 7 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 8 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 8 months ago
WEHI, Melbourne, Australia
A: Collapse FDR value of probes detecting the same gene
9 years, 9 months ago
WEHI, Melbourne, Australia
A: Effects of continuous variable with adjustment for gender
9 years, 9 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 9 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 9 months ago
WEHI, Melbourne, Australia
A: select negative control probes with GEOquery
9 years, 9 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 9 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 9 months ago
WEHI, Melbourne, Australia
Differences between edgeR's and limma+voom's implementation of camera/roast/romer
9 years, 9 months ago
WEHI, Melbourne, Australia
A: Random effects with limma's camera()
9 years, 9 months ago
WEHI, Melbourne, Australia
A: Differences between edgeR's and limma+voom's implementation of camera/roast/rome
9 years, 10 months ago
WEHI, Melbourne, Australia
A: Annotation problem while quering hgug4112a.db with function select and duplicate
9 years, 10 months ago
WEHI, Melbourne, Australia
A: Setting contrasts in limma where null hypothesis is that Test = 2 x Control
9 years, 10 months ago
WEHI, Melbourne, Australia
GenomicAlignments is too slow with summarizeOverlaps
9 years, 10 months ago
WEHI, Melbourne, Australia
A: limma symbols2indices from gmt files versus rdata files
9 years, 10 months ago
WEHI, Melbourne, Australia
GenomicAlignments is too slow with summarizeOverlaps
9 years, 10 months ago
WEHI, Melbourne, Australia
Effect size similar to Cohen's d in limma
9 years, 10 months ago
WEHI, Melbourne, Australia
Effect size similar to Cohen's d in limma
9 years, 11 months ago
WEHI, Melbourne, Australia
Effect size similar to Cohen's d in limma
9 years, 12 months ago
WEHI, Melbourne, Australia
Effect size similar to Cohen's d in limma
9 years, 12 months ago
WEHI, Melbourne, Australia
A: Big differences in logfoldchange for some genes between edgeR and DESeq2
9 years, 12 months ago
WEHI, Melbourne, Australia
Effect size similar to Cohen's d in limma
10 years ago
WEHI, Melbourne, Australia
A: Normalization and background correction issues for specific Illumina data sets u
10 years ago
WEHI, Melbourne, Australia
A: How to get 'previous symbols'? is there HGNC Mart connection?
10 years, 1 month ago
WEHI, Melbourne, Australia
Difference in Goodness of fit when applying limma to one-colour vs. two-colour arrays
10 years, 1 month ago
WEHI, Melbourne, Australia
How to read single red channel data with Limma
10 years, 1 month ago
WEHI, Melbourne, Australia
How to generate STF file for custom array in limma?
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