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following contributors:
5 years ago
WEHI, Melbourne, Australia
A: limma voom Mean-variance trend plot: x-axis?
5 years ago
WEHI, Melbourne, Australia
A: moderated p-values limma style from std.error, df, estimate data.
5 years, 2 months ago
WEHI, Melbourne, Australia
A: Featurecount -- normalized Path error
5 years, 2 months ago
WEHI, Melbourne, Australia
A: Use of pseudoalignment estimated counts as input to edgeR and Limma-Voom
5 years, 3 months ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
5 years, 3 months ago
WEHI, Melbourne, Australia
subread gives segfaults when supplied with falsely-identified paired end reads
5 years, 3 months ago
WEHI, Melbourne, Australia
nestedF in decideTests: an analogue of Anova with post-hoc t-tests?
5 years, 3 months ago
WEHI, Melbourne, Australia
Why different filtering criteria using CPM to filter the RNA-seq count data in edgeR have so much influence on the number of DE genes?
5 years, 3 months ago
WEHI, Melbourne, Australia
Any efficient workaround to identify highly variable genes in Affymetrix microarray expression data?
5 years, 3 months ago
WEHI, Melbourne, Australia
ANOVA-like test via treat() in limma
5 years, 3 months ago
WEHI, Melbourne, Australia
differential expression analysis of htseq data with edgeR/voom
5 years, 3 months ago
WEHI, Melbourne, Australia
Volcanoplot with limma - RAW P-values or Adj.P-Values
5 years, 3 months ago
WEHI, Melbourne, Australia
Odd P-value distribution in edgeR on RRBS data
5 years, 3 months ago
WEHI, Melbourne, Australia
Removing continuous covariate effects in limma analysis
5 years, 3 months ago
WEHI, Melbourne, Australia
A: differential expression analysis of htseq data with edgeR/voom
5 years, 3 months ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
5 years, 3 months ago
WEHI, Melbourne, Australia
A: Odd P-value distribution in edgeR on RRBS data
5 years, 5 months ago
WEHI, Melbourne, Australia
ANOVA-like test via treat() in limma
5 years, 5 months ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
5 years, 7 months ago
WEHI, Melbourne, Australia
A: nestedF in decideTests: an analogue of Anova with post-hoc t-tests?
5 years, 7 months ago
WEHI, Melbourne, Australia
A: Incorporating subject ID as random effect for repeated measures RNA-Seq analysis
5 years, 8 months ago
WEHI, Melbourne, Australia
nestedF in decideTests: an analogue of Anova with post-hoc t-tests?
5 years, 8 months ago
WEHI, Melbourne, Australia
ANOVA-like test via treat() in limma
5 years, 8 months ago
WEHI, Melbourne, Australia
Why different filtering criteria using CPM to filter the RNA-seq count data in edgeR have so much influence on the number of DE genes?
5 years, 8 months ago
WEHI, Melbourne, Australia
A: How to combine multiple probes representing a single gene?
5 years, 8 months ago
WEHI, Melbourne, Australia
A: Anova; can I use lmFit and eBayes from Limma, or should it be aov?
5 years, 8 months ago
WEHI, Melbourne, Australia
Why different filtering criteria using CPM to filter the RNA-seq count data in edgeR have so much influence on the number of DE genes?
5 years, 8 months ago
WEHI, Melbourne, Australia
ANOVA-like test via treat() in limma
5 years, 9 months ago
WEHI, Melbourne, Australia
A: ERROR: No residual degrees of freedom in linear model fits
5 years, 10 months ago
WEHI, Melbourne, Australia
A: Differential profile for only one normal - tumor pair
5 years, 10 months ago
WEHI, Melbourne, Australia
A: Using limma to model gene expression changes with age
5 years, 11 months ago
WEHI, Melbourne, Australia
using duplicateCorrelation with limma+voom for RNA-seq data
5 years, 11 months ago
WEHI, Melbourne, Australia
Representative gene expression value in one condition with several replicates
5 years, 11 months ago
WEHI, Melbourne, Australia
Subsetting ELists and Applying sva to Iterative Differential Gene Expression Tests
5 years, 11 months ago
WEHI, Melbourne, Australia
ANOVA-like test via treat() in limma
5 years, 11 months ago
WEHI, Melbourne, Australia
Why different filtering criteria using CPM to filter the RNA-seq count data in edgeR have so much influence on the number of DE genes?
5 years, 11 months ago
WEHI, Melbourne, Australia
Using limma to model gene expression changes with age
5 years, 11 months ago
WEHI, Melbourne, Australia
Answer: Why DESeq2 and edgeR give different results?
5 years, 11 months ago
WEHI, Melbourne, Australia
A: edgeR: How can I determine which factors significantly explain my DE genes?
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