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7 years, 2 months ago
United States
A: DE genes comparison of different treatments from microarray and RNAseq data
7 years, 2 months ago
United States
A: Gene-GO-term relationship discrepancy between org.Hs.eg.db and geneontology.org
7 years, 2 months ago
United States
A: numInCat in goseq inconsistent with value obtained from org.Hs.eg.db
7 years, 2 months ago
United States
A: How to export enrichGO results for future visualization with barplot, dotplot, e
7 years, 2 months ago
United States
DE genes comparison of different treatments from microarray and RNAseq data
7 years, 2 months ago
United States
Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not found
7 years, 2 months ago
United States
How to export enrichGO results for future visualization with barplot, dotplot, emapplot...
7 years, 4 months ago
United States
A: Does Fold change cutoff changes the FDR value using glmTreat function in edgeR?
7 years, 5 months ago
United States
Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not found
7 years, 5 months ago
United States
A: Gage package; go.gset() function error: argument "go_id" is missing
7 years, 5 months ago
United States
Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not found
7 years, 5 months ago
United States
A: Unable to install a Bioconductor package to local directory
7 years, 6 months ago
United States
A: makeTxDbFromUCSC("hg19", "refGene") gives "not supported" error
7 years, 8 months ago
United States
A: convert Gene collection to gene list for camera function
7 years, 11 months ago
United States
A: How to set 'strandMode' with summarizeOverlaps()
7 years, 12 months ago
United States
A: Strong upwards correlation between log fold change and average log expression in
8 years ago
United States
A: Presence of GO annotations for human mitochondrial genes in org.Hs.eg.db?
8 years ago
United States
A: featureCounts in-built annotation doesn't match BioMart annotation?
8 years, 3 months ago
United States
A: Identify up and down regulated genes in affymetrix data
8 years, 3 months ago
United States
A: How to set custom Brainarray annotation for Biobase ExpressionSet object?
8 years, 4 months ago
United States
Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not found
8 years, 4 months ago
United States
package ‘edgeR’ is not available (for R version 3.1.2)
8 years, 4 months ago
United States
Best way to convert uniprot accessions to entrez gene identifiers in R
8 years, 4 months ago
United States
Limma: Paired samples, multiple groups: problems understanding contrasts and model.matrix
8 years, 4 months ago
United States
Filtering absent transcripts from Gene ST array
8 years, 4 months ago
United States
Can edgeR TMM normalization be used for other count data?
8 years, 4 months ago
United States
Agilent microarray chip normalization/background correction
8 years, 4 months ago
United States
Why do I get different GO term sizes using the same gene universe for 2 analyses with GOstats?
8 years, 4 months ago
United States
how to extract Granges not overlapping with other ganges?
8 years, 4 months ago
United States
Strong upwards correlation between log fold change and average log expression in MD plot of Limma
8 years, 4 months ago
United States
[FIXED] Error in Gviz (actually, rtracklayer) | IdeogramTrack
8 years, 4 months ago
United States
including information indicating upregulation/downregulation of genes in goana()
8 years, 4 months ago
United States
Voom: estimation of mean-variance relationship with gene expression data normalized with methods other than cpm
8 years, 4 months ago
United States
Unable to install a Bioconductor package to local directory
8 years, 4 months ago
United States
how to transform a list of IRanges into a RangesList instance
8 years, 4 months ago
United States
featureCounts in-built annotation doesn't match BioMart annotation?
8 years, 4 months ago
United States
Identify up and down regulated genes in affymetrix data
8 years, 4 months ago
United States
Interpretation of voom limma's intercept coefficient
8 years, 4 months ago
United States
Finding gene lengths of mm10 to calculate rpkm from count matrix of rna-seq dataset
8 years, 4 months ago
United States
How to deal with Affymetrix GeneChip probeids that map to multiple genes
8 years, 5 months ago
United States
Limma: Paired samples, multiple groups: problems understanding contrasts and model.matrix
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