To put it simply, I have a list of genes with information about whether they are upregulated or downregulated. What should the format of the input be when using goana() such that I can include the information about upregulation or downregulation of each of the genes? I understand that goana() can accept a vector of genes or MArrayLM fit object.
The example code on the help page for
goanamight also help. See the example starting
## Default usage.
Dear James and Gordon,
Thank you so much! I got it to work.