RiboProfiling package-error in creating GRange object from GAlignment object

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ibtissam.jabre • 0

@ibtissamjabre-14323

Last seen 7.0 years ago

Hello, 
i'm to run the following in the RiboProfiling pacakage 
#  #transform the GAlignments object into a GRanges object
#  #(faster processing of the object)
#  alnGRanges <- readsToStartOrEnd(aln, what="start") however I'm always getting an error that

readsToStartOrEnd doesn't exit. Can someone please help me with that

Best regards -ibtissam jabre

software error riboprofiling • 938 views

ADD COMMENT • link updated 7.1 years ago by shepherl 4.1k • written 7.1 years ago by ibtissam.jabre • 0

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Please provide more information. Some other helpful information would be additional commands run previous to this error with any output, `head(aln)` object or some other summary method to show what is in aln, and `sessionInfo()`.

ADD REPLY • link 7.1 years ago shepherl 4.1k

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