bnbc: Does it makes sense to make batch effect correction optional?
0
0
Entering edit mode
Alejandro Reyes ★ 1.9k
@alejandro-reyes-5124
Last seen 5 months ago
Novartis Institutes for BioMedical Reseā€¦

Thanks for developing bnbc! I am interested in using the proposed across sample normalization method (smoothing + per-band quantile normalization). However, my data was processed in a single batch and thus the batch correction step might not be needed. In the current implementation, I did not find a way to skip the batch correction step. Is this possible? Does it make sense?

bnbc • 866 views
ADD COMMENT

Login before adding your answer.

Traffic: 959 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6