Question

In DESEQ2, how was the difference in deviance between the reduced model and the full model computed when using LRT test?

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kulotwewe • 0

@kulotwewe-14529

Last seen 8.1 years ago

Is the variable Deseq$LRTStatistic equal to

-2 Log(Likelihood of full model) - -2 Log(Likelihood of reduced model) ??

Thanks!

deseq2 • 579 views

ADD COMMENT • link updated 8.1 years ago by Michael Love 43k • written 8.1 years ago by kulotwewe • 0

score 0 · Answer 1 · 2017-12-04

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Michael Love 43k

@mikelove

Last seen 10 days ago

United States

It's 2 * (loglike_full - loglike_reduced).

ADD COMMENT • link 8.1 years ago Michael Love 43k