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Comment: DESeq2 question: why I got discrepancy results for DEGs when using different way
by
Michael Love
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Q1: No I meant just use your results from above that you called "the first way". Not sub-setting, as you will have worse dispersion estimat…
Comment: Best practice for quantifying sncRNA
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Abhishek
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I wonder what would be a good metric to assess the quantification quality
Comment: Best practice for quantifying sncRNA
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Abhishek
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Thank you for sharing your thoughts.
I used Salmon and indexed using hg38 gencodes transcriptome. After the tximport step, I ended up gett…
Comment: DESeq2 question: why I got discrepancy results for DEGs when using different way
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Ming
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Thx so much for the diagnosis and advice. Indeed, in my data, some genes have all 0 for all sampes of a contrast for both "Mut" and "WT" gr…
Comment: Best practice for quantifying sncRNA
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> It's my opinion that miRNA is a mirage intended to make MDs salivate and biostatisticians wail in misery, but what do I know?
I'll tell …
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