Entering edit mode
Dear all,
I have a very basic question:
I have a list of smc objects and I want to extract the info available in slot "ids".
How can I do that? The list was creted using the readGmt function from the PGSEA package. However, I do not have the original gmt file.
Below you find an example of one of the list elements.
Thanks for your help!
Best, Dagmar
c2E[[100]] # An object of class "smc" # Slot "reference": # [1] "KEGG_ENDOCYTOSIS" # # Slot "desc": # [1] "http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ENDOCYTOSIS" # # Slot "source": # character(0) # # Slot "design": # character(0) # # Slot "identifier": # character(0) # # Slot "species": # character(0) # # Slot "data": # character(0) # # Slot "private": # character(0) # # Slot "creator": # character(0) # # Slot "ids": # [1] "F2R" "EPN3" "IQSEC1" "IQSEC3" "ADRBK2" "ADRBK1"