Question: What do you do with the DESeq2 NA results ?. How do you manage them ?
0
gravatar for arfranco
21 months ago by
arfranco130
European Union
arfranco130 wrote:

After reading the vignette, I don't actually have a clear idea about what to do with the rows containing NA after a DESeq2 analysis. I am at a loss here.

Can you provide with some hints ?

deseq2 na values • 288 views
ADD COMMENTlink modified 21 months ago by Michael Love25k • written 21 months ago by arfranco130
Answer: What do you do with the DESeq2 NA results ?. How do you manage them ?
1
gravatar for Michael Love
21 months ago by
Michael Love25k
United States
Michael Love25k wrote:

These can be ignored for the purpose of building a FDR bounded set of DE genes. The NA as you know represent genes with large count outliers or genes with too low signal for DE detection.

ADD COMMENTlink written 21 months ago by Michael Love25k
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