Question: What do you do with the DESeq2 NA results ?. How do you manage them ?
0
gravatar for arfranco
12 months ago by
arfranco130
European Union
arfranco130 wrote:

After reading the vignette, I don't actually have a clear idea about what to do with the rows containing NA after a DESeq2 analysis. I am at a loss here.

Can you provide with some hints ?

deseq2 na values • 203 views
ADD COMMENTlink modified 12 months ago by Michael Love21k • written 12 months ago by arfranco130
Answer: What do you do with the DESeq2 NA results ?. How do you manage them ?
1
gravatar for Michael Love
12 months ago by
Michael Love21k
United States
Michael Love21k wrote:

These can be ignored for the purpose of building a FDR bounded set of DE genes. The NA as you know represent genes with large count outliers or genes with too low signal for DE detection.

ADD COMMENTlink written 12 months ago by Michael Love21k
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