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Question: What do you do with the DESeq2 NA results ?. How do you manage them ?
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gravatar for arfranco
4 months ago by
arfranco120
European Union
arfranco120 wrote:

After reading the vignette, I don't actually have a clear idea about what to do with the rows containing NA after a DESeq2 analysis. I am at a loss here.

Can you provide with some hints ?

ADD COMMENTlink modified 4 months ago by Michael Love17k • written 4 months ago by arfranco120
1
gravatar for Michael Love
4 months ago by
Michael Love17k
United States
Michael Love17k wrote:

These can be ignored for the purpose of building a FDR bounded set of DE genes. The NA as you know represent genes with large count outliers or genes with too low signal for DE detection.

ADD COMMENTlink written 4 months ago by Michael Love17k
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