An embedded and charset-unspecified text was scrubbed... Name: not available Url: https://stat.ethz.ch/pipermail/bioconductor/attachments/20051014/ 7f29550a/attachment.pl

Nayeem Quayum wrote: > Hello to everybody. I was wondering how could I get the P/A/M calls using > pmonly of subtractmm methods. I found a function called mas5calls that spit > all the P/A/M calls in a separate data frame and I am looking other function > like this to calculate P/A/M calls for other methods. I tried to do that > using expresso but all it gave the expression vlaues not the P/A/M calls. > Any kind of help is appreciated. Thanks. I am not sure that your question makes any sense. The MAS5 P/A/M calls are based on a comparison between the PM and MM probes. On what comparison would these calls be based in a PM-only method? Best, Jim > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor -- James W. MacDonald Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623