merging gseaResult objects
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robmarin • 0
@robmarin-14923
Last seen 6.8 years ago

 

Hi everyone, I'm wondering if it is possible to merge gseaResult objects (obtained using the same parameters, the same genes, but different gene sets). Thank you in advance!Roberta

 

 

 

clusterprofiler gsea • 2.0k views
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Guangchuang Yu ★ 1.2k
@guangchuang-yu-5419
Last seen 22 days ago
China/Guangzhou/Southern Medical Univer…

it is possible but currently not supported.
 

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Thank you for your answer, but how could I merge them? My aim is that of running in parallel the gsea analysis, for different gene sets of the same family (for instance C2 in the MSigDB) and then merge all in one gseaResult to use dot plot, enrichmap and other functions that in clusterprofiler work with gsearesult objects as input.

 

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