Question: merging gseaResult objects
0
gravatar for robmarin
21 months ago by
robmarin0
robmarin0 wrote:

 

Hi everyone, I'm wondering if it is possible to merge gseaResult objects (obtained using the same parameters, the same genes, but different gene sets). Thank you in advance!Roberta

 

 

 

clusterprofiler gsea • 427 views
ADD COMMENTlink modified 21 months ago by Guangchuang Yu1.1k • written 21 months ago by robmarin0
Answer: merging gseaResult objects
0
gravatar for Guangchuang Yu
21 months ago by
Guangchuang Yu1.1k
China/Guangzhou/Southern Medical University
Guangchuang Yu1.1k wrote:

it is possible but currently not supported.
 

ADD COMMENTlink written 21 months ago by Guangchuang Yu1.1k

Thank you for your answer, but how could I merge them? My aim is that of running in parallel the gsea analysis, for different gene sets of the same family (for instance C2 in the MSigDB) and then merge all in one gseaResult to use dot plot, enrichmap and other functions that in clusterprofiler work with gsearesult objects as input.

 

ADD REPLYlink written 21 months ago by robmarin0
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