Hi,

I am willing to import TPM from RSEM output files. I noticed that I still obtain the FPKM values even if I am using the argument abundanceCol="TPM"

my command line is currently rsem = tximport(<list_of_genes.results_files>, type='rsem', txIn = FALSE, abundanceCol="TPM")

Thanks a lot in advance for your help,

All the best,

Laure

Thanks. This is already fixed in the devel branch and will show up in the release in April. Note that you can always set the columns manually by setting type=“none”.