Error while Installing DESeq2
1
0
Entering edit mode
@kkathirvel93-15409
Last seen 6.6 years ago

Hi all,

 I am new to R. I am trying install DESeq2 in R for RNA-Seq data analysis. But i am getting this error at the end.....

1: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘XML’ had non-zero exit status
2: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘annotate’ had non-zero exit status
3: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘genefilter’ had non-zero exit status
4: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘geneplotter’ had non-zero exit status
5: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘DESeq2’ had non-zero exit status

I am working in Ubuntu 16.04 . Can anyone help me out.. Thanks in advance

software error R deseq2 rnaseq • 1.9k views
ADD COMMENT
0
Entering edit mode
@mikelove
Last seen 22 hours ago
United States

See instructions here:

https://bioconductor.org/install

ADD COMMENT

Login before adding your answer.

Traffic: 939 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6