Getting unmodified Affy-Data via R+ and the Affy package...
0
0
Entering edit mode
@joern-wessels-230
Last seen 9.7 years ago
Dear people at Bioconductor, First of all I would like to compliment you on your great site and your even greater software packages. I started working with R+ only recently - and since I am a biologist (and relativly new to the topic of Microarrys as well) and not a statistician kept very close to the path you have shown me. But there is one thing I would like to do that I did not find instructions for. So here is my question: We have a tool called GeneSpring (I am sure you are familiar with it) that I used for data-analysis. My problem is that I can only import Affy- Scaled data into it taking away much of its power (for example doing a median-polish...). I would like to know how I can tell R (or any other tool you might know of), to give me the raw chip data - unmodified. Or a recommandation how to import RMA normalized data without fuss. As I have already told you I am relatively new to that field of study - maybe my questions are rather naive, but any help is appreciated! Thanks, Joern Wessels Joern Wessels Diplom Biologe Philipps-Universitaet Marburg Fachbereich Biologie / Tierphysiologie AG Heldmaier Karl-von-Frisch-Str. 8 35032 Marburg
GeneSpring GeneSpring • 666 views
ADD COMMENT

Login before adding your answer.

Traffic: 562 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6