Getting error in running maser 0.99.16
0
0
Entering edit mode
Reza • 0
@reza-17253
Last seen 6.1 years ago

Hi everyone,

I'm using rMATS for alternative splicing analysis. I want to visualize the output by maser 0.99.16 but encountered the following error.

Error in .Call2("solve_user_SEW0", start, end, width, PACKAGE = "IRanges") :

  solving row 4462: range cannot be determined from the supplied arguments (too many NAs)

In addition: Warning messages:

1: In scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  :

  EOF within quoted string

2: In scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  :

  number of items read is not a multiple of the number of columns

 

Can anybody suggest me how to fix this error?

Thanks

 

maser R rMATs alternative splicing • 1.4k views
ADD COMMENT
0
Entering edit mode

Hello kalak_555!

We believe that this post does not fit the main topic of this site.

rMATS isn't a Bioconductor package. Please contact the maintainer directly.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLY
0
Entering edit mode

Hi James,

I got the error in maser 0.99.16 that is a Bioconductor package. This package can be run for the output of rMATs.

Best regards

ADD REPLY

Login before adding your answer.

Traffic: 425 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6