Question: Getting error in running maser 0.99.16
0
gravatar for Reza
14 months ago by
Reza0
Reza0 wrote:

Hi everyone,

I'm using rMATS for alternative splicing analysis. I want to visualize the output by maser 0.99.16 but encountered the following error.

Error in .Call2("solve_user_SEW0", start, end, width, PACKAGE = "IRanges") :

  solving row 4462: range cannot be determined from the supplied arguments (too many NAs)

In addition: Warning messages:

1: In scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  :

  EOF within quoted string

2: In scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  :

  number of items read is not a multiple of the number of columns

 

Can anybody suggest me how to fix this error?

Thanks

 

ADD COMMENTlink modified 14 months ago • written 14 months ago by Reza0

Hello kalak_555!

We believe that this post does not fit the main topic of this site.

rMATS isn't a Bioconductor package. Please contact the maintainer directly.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink written 14 months ago by James W. MacDonald51k

Hi James,

I got the error in maser 0.99.16 that is a Bioconductor package. This package can be run for the output of rMATs.

Best regards

ADD REPLYlink written 14 months ago by Reza0
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