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Question: BHC time series cluster
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gravatar for shabnam.salimi.m.d
6 days ago by
shabnam.salimi.m.d0 wrote:

Hello,

I try to use BHC for high-dimensional phenotype data that are repeatedly measured over time. 

the data is 3180 as three repeats of 1060 people and 117 features. 

I used below syntax but it did not work. 

hc2 <- bhc(data, itemLabels, 0, timePoints, "time-course",

           numReps=3, noiseMode=0,  robust=1, verbose=TRUE)
plot(hc2, axes=FALSE)

 

the rows are the id and the columns are the features and values are 0/1 for each feature. 

I think I am missing points about the data format. 

Please kindly guide. 

Thanks,

Shabnam

 

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