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aboumarshal
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@aboumarshal-19661
Last seen 5.8 years ago
I know how NES is calculated in GSEA method using ClusterProfiler. But I don't understand its utility ?
I have read some where (in borad institute paper) that NES is used to calculated the false discovery rate (FDR). So in ClusterProfiler how NES is used ? And how p.adjsut ise calculated ?
Thank you.
You can refer to this post about GSEA in another forum.
I hope it helps.
Best, Mikhael