Hello everyone I am getting an error from DESeq2 saying that some of my numer ar not integers but I am using counts data directly without any normalization or data transformation so I dont understand why I get this error: These are my data type
> otu CTR1 CTR11 CTR12 CTR14 CTR15 CTR16 CTR17 CTR19 CTR2
> Acidaminococcus 0 0 0 0 0 0 92460950 237775700 75412750
> Acidiphilium 0 0 0 0 0 0 16651500 0 0
> Acidovorax 0 0 0 0 0 0 0 0 0
> Acinetobacter 0 0 0 0 0 0 6489200 0 0
Does anyone can help me understand why I get this error:
> dds<-DESeqDataSetFromMatrix(countData=cts,colData=coldata,design=~condition)
Error in DESeqDataSet(se, design = design, ignoreRank) :
some values in assay are not integers
Thanks