Olivier BUHARD wrote: > Dear all, > > This message is a kind of 'to be continued...' for that send by /Yu- An > Dong,/ [BioC] problems with GO package data > <https: stat.ethz.ch="" pipermail="" bioconductor="" 2006-february="" 011760.ht="" ml="">, > last february. > I've just installed R 2.2.1 on my computer (Windows based version) and > downloaded Bioconductor available for this version via the graphical > interface facility provided by R. Then installed GO 1.8.2 using the zip > package, all goes well... > I just tried to take a look at the output of GOLOCUSID2GO like Yu-An > Dong have done it after loading GOstats (1.4.0) package : > // > GOLOCUSID2GO[["4121"]] > > //Then, after a while, R hangs up, windows tells my the program Rgui.exe > is to be close by windows. So here, I don't think impatience is the > explanaition of this problem :-( > > If anyone could give my a few hints, it would be great. My first hint would be to use the Bioconductor listserv for BioC related questions rather than R-help. I have moved this post there for you. I don't have any problems getting the output from this environment, so it is likely some problem with your local installation. As with most posts to BioC, you should include the output from a call to sessionInfo(). Another bit of information that might be helpful is the amount of RAM on your machine. It takes about 328 Mb of RAM on my WinXP box to do this same call. In this situation I don't know if Windows will use the swap file if you don't have enough memory or if it will exit ungracefully as you describe. Best, Jim -- James W. MacDonald, M.S. Biostatistician Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623