PhyloProfile is not available for R version 3.6.1?
1
1
Entering edit mode
hansd286 ▴ 10
@hansd286-22472
Last seen 5.0 years ago

Hello,

I tried to install the package PhyloProfile via RStudio and Terminal using:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PhyloProfile")

Bioconductor version 3.9 (BiocManager 1.30.10), R 3.6.1 (2019-07-05)
Installing package(s) 'PhyloProfile'
Installation path not writeable, unable to update packages: Matrix
Warnmeldung:
package ‘PhyloProfile’ is not available (for R version 3.6.1)

Thanks in advance! Hans

> sessionInfo()
R version 3.6.1 (2019-07-05)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.6 LTS

Matrix products: default
BLAS:   /usr/lib/libblas/libblas.so.3.6.0
LAPACK: /usr/lib/lapack/liblapack.so.3.6.0

locale:
 [1] LC_CTYPE=de_DE.UTF-8       LC_NUMERIC=C               LC_TIME=de_DE.UTF-8       
 [4] LC_COLLATE=de_DE.UTF-8     LC_MONETARY=de_DE.UTF-8    LC_MESSAGES=de_DE.UTF-8   
 [7] LC_PAPER=de_DE.UTF-8       LC_NAME=C                  LC_ADDRESS=C              
[10] LC_TELEPHONE=C             LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] BiocManager_1.30.10 compiler_3.6.1      tools_3.6.1         grid_3.6.1         
[5] lattice_0.20-38    
>
PhyloProfile • 919 views
ADD COMMENT
1
Entering edit mode
@martin-morgan-1513
Last seen 3 months ago
United States

`BiocManager indicates that you are using Bioconductor 3.9. Update to 3.10

BiocManager::install(version = "3.10")

and try again.

ADD COMMENT
0
Entering edit mode

Thank you Mr. Morgan, problem solved. Hans

ADD REPLY

Login before adding your answer.

Traffic: 958 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6