What's new in the graph package
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Seth Falcon ★ 7.4k
@seth-falcon-992
Last seen 11.2 years ago
The graph package provides data structures and methods for representing and computing on graphs (collections of nodes and edges). Version 1.10.0, available in the Bioc 1.8 release (requires R 2.3.0) includes a number enhancements as described below. * Node and edge attribute handling improved and documented. For details see http://bioconductor.org/packages/1.8/bioc/vignettes/graph/inst/doc/g raphAttributes.pdf * New way to create graphNEL instances We now accept two structures for the edgeL argument, a list similar in structure to that returned by edges(g) and a more complicated nested structure as documented for edgeL. * GXL improvements Node and edge attributes are now handled by fromGXL and toGXL. Fixes for writing undirected graphs. * Coercion methods improved Added graphAM <==> graphNEL coercion. Speedup for matrix ==> graphNEL. * Many other small bug fixes and improvements.
graph graph • 1.1k views
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