Entering edit mode
shipy3
•
0
@shipy3-23666
Last seen 4.6 years ago
Hi everyone. I try to load GenomicFeatures
package but fail.
> library(GenomicFeatures)
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:parallel':
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unsplit, which, which.max, which.min
Loading required package: S4Vectors
Loading required package: stats4
Attaching package: 'S4Vectors'
The following object is masked from 'package:base':
expand.grid
Loading required package: IRanges
Loading required package: GenomeInfoDb
Loading required package: GenomicRanges
Loading required package: AnnotationDbi
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Error: package or namespace load failed for 'GenomicFeatures' in namespaceExport(ns, exports):
undefined exports: %>%
Here is the information of my R session:
> sessionInfo()
R version 3.6.0 (2019-04-26)
Platform: x86_64-redhat-linux-gnu (64-bit)
Running under: CentOS Linux 7 (Core)
Matrix products: default
BLAS/LAPACK: /usr/lib64/R/lib/libRblas.so
locale:
[1] C
attached base packages:
[1] stats4 parallel stats graphics grDevices utils datasets
[8] methods base
other attached packages:
[1] AnnotationDbi_1.48.0 Biobase_2.46.0 GenomicRanges_1.38.0
[4] GenomeInfoDb_1.22.1 IRanges_2.20.2 S4Vectors_0.24.4
[7] BiocGenerics_0.32.0
loaded via a namespace (and not attached):
[1] Rcpp_1.0.3 pillar_1.4.2 compiler_3.6.0
[4] XVector_0.26.0 prettyunits_1.0.2 bitops_1.0-6
[7] tools_3.6.0 zlibbioc_1.32.0 progress_1.2.2
[10] digest_0.6.23 bit_1.1-15.2 lifecycle_0.2.0
[13] tibble_2.1.3 RSQLite_2.2.0 memoise_1.1.0
[16] pkgconfig_2.0.3 rlang_0.4.6 DBI_1.1.0
[19] GenomeInfoDbData_1.2.2 dplyr_1.0.0 stringr_1.4.0
[22] httr_1.4.1 generics_0.0.2 Biostrings_2.54.0
[25] vctrs_0.3.1 askpass_1.1 hms_0.5.3
[28] tidyselect_1.1.0 bit64_0.9-7 glue_1.4.1
[31] R6_2.4.1 XML_3.99-0.3 purrr_0.3.3
[34] blob_1.2.1 magrittr_1.5 assertthat_0.2.1
[37] stringi_1.4.3 RCurl_1.95-4.12 openssl_1.4.1
[40] crayon_1.3.4
Could anyone please tell me how to fix it ? Thanks a lot!