Dear all,

I hope someone can help me, this is driving me crazy ;).

I am doing a Differential Expression Analysis with DEseq2. I got my results (res) which contains lets say 100 rows of genes. Now I want to remove 5 genes (gene called "fg", gene called "gh", ...). I tried with "select" but it tells me that this function cannot be used for DeSeq.

How can i remove 5 genes in res?

Thank you, Bine

You can make a data.frame version of your res object, and manipulate that in the usual ways.

res[-idx,]

Will remove the rows in idx.