Not able to install package rnaseqGene
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guoyinping • 0
@guoyinping-24136
Last seen 4.6 years ago

Hello,

I tried to install the package "rnaseqGene" into Rstudio. The error showed as below. I uninstalled R and Rstudio, and reinstalled them, but it didn't help. The same error showed.

R version 4.0.2 (2020-06-22) -- "Taking Off Again" Copyright (C) 2020 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 (64-bit)

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[Workspace loaded from ~/.RData]

library(BiocManager) Bioconductor version 3.12 (BiocManager 1.30.10), ?BiocManager::install for help BiocManager::install("rnaseqGene") Bioconductor version 3.12 (BiocManager 1.30.10), R 4.0.2 (2020-06-22) Installing package(s) 'rnaseqGene' installing the source package ‘rnaseqGene’

trying URL 'https://bioconductor.org/packages/3.12/workflows/src/contrib/rnaseqGene_1.13.1.tar.gz' Content type 'application/x-gzip' length 1286532 bytes (1.2 MB) downloaded 1.2 MB

ERROR: failed to lock directory 'C:/Users/yguo.MYID/Documents/R/win-library/4.0' for modifying Try removing 'C:/Users/yguo.MYID/Documents/R/win-library/4.0/00LOCK-rnaseqGene'

The downloaded source packages are in ‘C:\Users\yguo.MYID\AppData\Local\Temp\RtmpwVwtHS\downloaded_packages’ Installation path not writeable, unable to update packages: MASS, mgcv, nlme, survival Warning message: In install.packages(...) : installation of package ‘rnaseqGene’ had non-zero exit status

deseq2 • 1.7k views
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@mikelove
Last seen 16 hours ago
United States

Have you tried to remove that directory and try again:

ERROR: failed to lock directory 'C:/Users/yguo.MYID/Documents/R/win-library/4.0' for modifying Try removing 'C:/Users/yguo.MYID/Documents/R/win-library/4.0/00LOCK-rnaseqGene'
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It worked after removing the directory. Thanks!

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