I am running differential expression on paired cancer samples from women who are healthy or obese.
I'm following '3.5 Comparisons both between and within subjects' and it references a
Patient Disease Tissue 1 Healthy Normal 1 Healthy Cancer 2 Healthy Normal 2 Healthy Cancer 3 Obese Normal 3 Obese Cancer 4 Obese Normal 4 Obese Cancer
targets dataframe different to the
y$samples dataframe which contains the
How do you create the
targets dataframe so that it the correct information reflects the file that is read in for that patient/sample?