Hi Christophe,
that suggests you need more memory. We're currently working on a
solution that consumes less memory. What's the configuration of the
machine you have available?
thanks,
b
On Nov 7, 2006, at 8:06 AM, Christophe Poulet wrote:
> Hello,
> Thanks for your last answer.
> When I try to execute the commands, R sends me a new error message:
>
> > library(makePlatformDesign)
> Loading required package: affyio
> Loading required package: oligo
> Loading required package: Biobase
> Loading required package: tools
>
> Welcome to Bioconductor
>
> Vignettes contain introductory material. To view, type
> 'openVignette()' or start with 'help(Biobase)'. For details
> on reading vignettes, see the openVignette help page.
>
> Loading required package: splines
>
> Welcome to the oligo Package!
>
> This package is under development,
> and therefore its documentation is
> to be improved. Please contact Benilton
> at bcarvalh <at> jhsph <dot> edu,
> in case you need further help.
> Warning messages:
> 1: package 'makePlatformDesign' was built under R version 2.5.0
> 2: package 'oligo' was built under R version 2.5.0
> > makePDpackage("Mapping50K_Xba240.CDF",
> + "Mapping50K_Xba240_probe_fasta",
> + "Mapping50K_Xba240_annot.csv",
> + type="SNP")
> affymetrix SNP
> The package will be called pdmapping50kxba240
> Reading Mapping50K_Xba240.CDF
> Creating environment....................Error: cannot allocate
> vector of size 460 Kb
> In addition: There were 50 or more warnings (use warnings() to see
> the first 50)
> > warning()
> Warning message:
> >
>
> What should I do?
> Thanks for your time.
> Best Regards,
>
> Christophe Poulet
> Laboratoire de Cytog?n?tique, CHU
> Universit? de Li?ge, Sart Tilman
> christophe.poulet at hotmail.com
>
>
> T?l?chargez le nouveau Windows Live Messenger ! Essayez-le !
