Michael Parisi <mparisi at="" sas.upenn.edu=""> writes: > I recently got a duo Intel Mac OSX and loaded many Bioconductor packages > that I had been using along with R 2.5.1. All of the packages load and > work except for tcltk, tkWidgets, ruuid, graph and GOstats. I get the > same error as posted previously about tcltk and tkWidgets (last on Sep > 19, 2006): Do you have X11 installed and running before starting R? What does capabilities() tell you? > >library(tcltk) > Loading Tcl/Tk interface ... Error in dyn.load(x, as.logical(local), > as.logical(now)) : > unable to load shared library > '/Library/Frameworks/R.framework/Versions/2.5/Resources/library/tclt k/libs/i386/tcltk.so': > > dlopen(/Library/Frameworks/R.framework/Versions/2.5/Resources/librar y/tcltk/libs/i386/tcltk.so, > 10): Library not loaded: /usr/X11R6/lib/libX11.6.dylib > Referenced from: > /Library/Frameworks/R.framework/Versions/2.5/Resources/library/tcltk /libs/i386/tcltk.so > Reason: image not found > Error : .onLoad failed in 'loadNamespace' for 'tcltk' > Error: package/namespace load failed for 'tcltk' This is perhaps a question better asked on R-sig-mac; I don't think the problem is Bioconductor specific. > Actually, loading ruuid gives me a slightly different message > > library(ruuid) > Error in library(ruuid) : there is no package called 'ruuid' How about Ruuid? -- Seth Falcon | Computational Biology | Fred Hutchinson Cancer Research Center http://bioconductor.org

Michael Parisi <mparisi at="" ...=""> writes: > > I recently got a duo Intel Mac OSX and loaded many Bioconductor packages > that I had been using along with R 2.5.1. All of the packages load and > work except for tcltk, tkWidgets, ruuid, graph and GOstats. I get the > same error as posted previously about tcltk and tkWidgets (last on Sep > 19, 2006): > hi, i encountered a similiar error with tcltk. Acutally theres nothing wrong with tcltk but X11R6 is missing and you have to install it from the cds that came with your mac. HTH! Regards, Alex