Converting rgug4130a.db to a NetAffx format
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@srinivas-iyyer-939
Last seen 9.7 years ago
Dear group, chipInfo sofware developed by Harvard biostats needs a NetAffx formated CSV file. I have a agilent data and I want to use GOSurfer tool to analyze expression data for GO analysis. GOSurfer input files such as GOPath.txt and other annotation files can be generated by ChipInfo sofware. unfortunately ChipInfo does not accept agilent style annotation format. What I want to do is, using rgug4130a.db library, I want to recreate a CSV file that looks almost like a NetAffx annotation CSV file. Is it possible to create a netaffx CSV file from Agilent annotations in BioC. Thanks Srini ________________________________________________________________ ____________________ Looking for last minute shopping deals?
Annotation GO rgug4130a Annotation GO rgug4130a • 656 views
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