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Klaus-Peter Pleissner
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70
@klaus-peter-pleissner-1790
Last seen 10.2 years ago
Hello
I have downloaded gtk-dev-2.10.11-win32-1.exe and installed GTK under
C:\GTK.
Then I installed ImageMagick-6.3.8-Q16
The path variable is :
PATH=C:\GTK\bin;C:\GTK\lib;d:\programme\imagemagick-6.3.8-q16;C:\WINDO
WS\system32
Then I installed EBImage_2.2.0.zip within R-GUI using Packages ->
Install packages from local zip files
>library(EBImage) gives following error (in German): Der
Prozedureinsprungspunkt "atk_relation_add_target" wurde in der
DLL"libatk-1.0-0.dll" nicht gefunden .
In English: The procedure entry point "atk_relation_add_target" was
not
found in DLL "libatk-1.0-0.dll"
Can you give me a hint to solve this problem, please ?
Regards
Klaus-Peter
P.S.
I have read the EBImage installation HOWTO
$version.string
[1] "R version 2.6.0 (2007-10-03)"
Oleg Sklyar wrote:
> Dear Jian,
>
> This is not EBImage error, but GTK configuration error, which is
> independent on the package: the package fails to find one of the
most
> basic GTK libraries that are required for its proper functioning.
>
> The package requires at least 2 dependencies that must be installed
> separately on Windows. biocLite does not do that because those are
not
> R, but system dependencies. GTK containing GDK is one of those.
> Unfortunately, often people use biocLite without thinking that many
> packages require system-level dependencies, which are not installed
and
> biocLite does not warn about it.
>
> Have you checked the installation manual for the package? Please
check
> this manual, ensure that everything what is in there is done. If it
> still does not work check if {GTK}\lib is in your PATH along with
> {GTK}\bin.
>
> If this all does not help, please post more details: versions of R,
> EBImage, GTK, ImageMagick that you are trying to use; the contents
of
> your PATH variable in part concerning GTK and ImageMagick
>
> Best,
> Oleg
>
>
> Yuan Jian wrote:
>
>> Hello,
>>
>> I have installed EBImage in windows XP:
>> > source("http://www.braju.com/R/hbLite.R")
>> > biocLite("EBImage")
>>
>> but when I do
>> >library(EBImage)
>> the following error message box appeared:
>> "This application has failed to start because libgdk-
win32-2.0-0.dll was not found,
>> Re-installing the application may fix this problem."
>>
>> I re-installed, the problem still is there.
>> can you help me to solve the problem?
>>
>>
>>
>>
>>
>>
>>
>>
>> "alex lam (RI)" <alex.lam at="" bbsrc.ac.uk=""> wrote:
>> Dear BioC users,
>>
>> I am going to use the custom CDF released by MBNI for the array
rae230a.
>> Does anyone know of any methods / webpage for getting basic
statistics
>> such as how many probesets did not match ensembl, how many probes
were
>> removed because of SNPs ... etc?
>>
>> Many thanks,
>> Alex
>> --------------------------------------------
>> Alex C. Lam
>> Roslin Institute (Edinburgh)
>> Midlothian
>> EH25 9PS
>> United Kingdom
>> Tel: +44 131 5274471
>>
>> Roslin Institute is a company limited by guarantee, registered in
>> Scotland (registered number SC157100) and a Scottish Charity
(registered
>> number SC023592). Our registered office is at Roslin, Midlothian,
EH25
>> 9PS. VAT registration number 847380013.
>>
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attachments) is
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are
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>>
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>>
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>>
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>
>
--
Mit freundlichen Gr?ssen / Best regards
Dr. Klaus-Peter Pleissner
Max Planck Institute for Infection Biology
Core Facility Bioinformatics
Charit?platz 1
D-10117 Berlin
Germany
*Phone:* +49-30-28460-119
*Fax:* +49-30-28460-507
*URL:* http://web.mpiib-berlin.mpg.de/bioinformatik <http: web="" .mpiib-berlin.mpg.de="" bioinformatik=""/>
*Email:* pleissner at mpiib-berlin.mpg.de <mailto:pleissner at="" mpiib-="" berlin.mpg.de="">