EBImage installation error
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@klaus-peter-pleissner-1790
Last seen 10.2 years ago
Hello I have downloaded gtk-dev-2.10.11-win32-1.exe and installed GTK under C:\GTK. Then I installed ImageMagick-6.3.8-Q16 The path variable is : PATH=C:\GTK\bin;C:\GTK\lib;d:\programme\imagemagick-6.3.8-q16;C:\WINDO WS\system32 Then I installed EBImage_2.2.0.zip within R-GUI using Packages -> Install packages from local zip files >library(EBImage) gives following error (in German): Der Prozedureinsprungspunkt "atk_relation_add_target" wurde in der DLL"libatk-1.0-0.dll" nicht gefunden . In English: The procedure entry point "atk_relation_add_target" was not found in DLL "libatk-1.0-0.dll" Can you give me a hint to solve this problem, please ? Regards Klaus-Peter P.S. I have read the EBImage installation HOWTO $version.string [1] "R version 2.6.0 (2007-10-03)" Oleg Sklyar wrote: > Dear Jian, > > This is not EBImage error, but GTK configuration error, which is > independent on the package: the package fails to find one of the most > basic GTK libraries that are required for its proper functioning. > > The package requires at least 2 dependencies that must be installed > separately on Windows. biocLite does not do that because those are not > R, but system dependencies. GTK containing GDK is one of those. > Unfortunately, often people use biocLite without thinking that many > packages require system-level dependencies, which are not installed and > biocLite does not warn about it. > > Have you checked the installation manual for the package? Please check > this manual, ensure that everything what is in there is done. If it > still does not work check if {GTK}\lib is in your PATH along with > {GTK}\bin. > > If this all does not help, please post more details: versions of R, > EBImage, GTK, ImageMagick that you are trying to use; the contents of > your PATH variable in part concerning GTK and ImageMagick > > Best, > Oleg > > > Yuan Jian wrote: > >> Hello, >> >> I have installed EBImage in windows XP: >> > source("http://www.braju.com/R/hbLite.R") >> > biocLite("EBImage") >> >> but when I do >> >library(EBImage) >> the following error message box appeared: >> "This application has failed to start because libgdk- win32-2.0-0.dll was not found, >> Re-installing the application may fix this problem." >> >> I re-installed, the problem still is there. >> can you help me to solve the problem? >> >> >> >> >> >> >> >> >> "alex lam (RI)" <alex.lam at="" bbsrc.ac.uk=""> wrote: >> Dear BioC users, >> >> I am going to use the custom CDF released by MBNI for the array rae230a. >> Does anyone know of any methods / webpage for getting basic statistics >> such as how many probesets did not match ensembl, how many probes were >> removed because of SNPs ... etc? >> >> Many thanks, >> Alex >> -------------------------------------------- >> Alex C. Lam >> Roslin Institute (Edinburgh) >> Midlothian >> EH25 9PS >> United Kingdom >> Tel: +44 131 5274471 >> >> Roslin Institute is a company limited by guarantee, registered in >> Scotland (registered number SC157100) and a Scottish Charity (registered >> number SC023592). Our registered office is at Roslin, Midlothian, EH25 >> 9PS. VAT registration number 847380013. >> >> The information contained in this e-mail (including any attachments) is >> confidential and is intended for the use of the addressee only. The >> opinions expressed within this e-mail (including any attachments) are >> the opinions of the sender and do not necessarily constitute those of >> Roslin Institute (Edinburgh) ("the Institute") unless specifically >> stated by a sender who is duly authorised to do so on behalf of the >> Institute >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at stat.math.ethz.ch >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >> >> >> >> --------------------------------- >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at stat.math.ethz.ch >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >> > > -- Mit freundlichen Gr?ssen / Best regards Dr. Klaus-Peter Pleissner Max Planck Institute for Infection Biology Core Facility Bioinformatics Charit?platz 1 D-10117 Berlin Germany *Phone:* +49-30-28460-119 *Fax:* +49-30-28460-507 *URL:* http://web.mpiib-berlin.mpg.de/bioinformatik <http: web="" .mpiib-berlin.mpg.de="" bioinformatik=""/> *Email:* pleissner at mpiib-berlin.mpg.de <mailto:pleissner at="" mpiib-="" berlin.mpg.de="">
cdf EBImage cdf EBImage • 912 views
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