Hi Xiaoyue, The lumiHumanAll.db package includes all the Illumina Human expression chips. You can use it for annotation purpose of HumanWG-6_V3 chip. However, unlike lumiHumanV1 or lumiHumanV2, it does not include the mapping information between the Illumina ID and nuID. In the near future, we plan to create a separate package for Illumina id mapping purpose. If your BeadStudio output file includes the probe sequence information, lumiR can automatically covert the data as nuID annotated, then you can use lumiHumanAll.db package without any problem. Pan On 6/3/08 3:44 PM, "Zhao, Xiaoyue" <zhaox at="" cshl.edu=""> wrote: > > Hi Pan, > > Do you have lumi annotation packages for the HumanWG-6_V3 and MouseWG-6_V2, > similar as lumiMouseV1 which is needed in lumiR function? > > Thanks a lot, > Xiaoyue > > > > ------------------------------------------------------ Pan Du, PhD Research Assistant Professor Northwestern University Biomedical Informatics Center 750 N. Lake Shore Drive, 11-176 Chicago, IL 60611 Office (312) 503-2360; Fax: (312) 503-5388 dupan at northwestern.edu