Hello, how can I create an annotation package for a platform where the primary is an I.M.A.G.E. clone ID? I would rather do everything within BioConductor instead of resorting to mapping these IDs to a Genbank ID via a web interface and then using makeHUMANCHIP_DB (AnnotationDbi) which accepts "gb", "ug", "eg", "refseq" or "gbNRef". This type of ID "image" used to be supported in the baseMapType of ABPkgBuilder. Many thanks. James.

James F. Reid wrote: > Hello, > > how can I create an annotation package for a platform where the > primary is an I.M.A.G.E. clone ID? > I would rather do everything within BioConductor instead of resorting > to mapping these IDs to a Genbank ID via a web interface and then > using makeHUMANCHIP_DB (AnnotationDbi) which accepts "gb", "ug", "eg", > "refseq" or "gbNRef". > This type of ID "image" used to be supported in the baseMapType of ABPkgBuilder. > > Many thanks. > James. > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > > Hi James, This format is not supported yet for AnnotationDbi, but I will be more than happy to work with you to change that. Please email me directly so that we can discuss the gory details. Marc