Installation of R in HPC. with shlib option.
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ALok ▴ 170
@alok-2917
Last seen 9.7 years ago
Dear All I am using RSPerl to call R from Perl in my workstation with fedora core -5, for which i used ./configure --enable-R-shlib option to configure R. The RSPerl interpreter works fine. while the same package i am trying to install in HPC cluster with centos showing the following error messeges. in make check ---------------------------Messege displayed on make check ------------------------------------------------ make[5]: Leaving directory `/root/package/R-2.7.2/src/library' make[4]: *** No rule to make target `../../src/library/graphics/all.R', needed by `base-Ex.Rout'. Stop. make[4]: Leaving directory `/root/package/R-2.7.2/tests/Examples' make[3]: *** [test-Examples-Base] Error 2 make[3]: Leaving directory `/root/package/R-2.7.2/tests/Examples' make[2]: *** [test-Examples] Error 2 make[2]: Leaving directory `/root/package/R-2.7.2/tests' make[1]: *** [test-all-basics] Error 1 make[1]: Leaving directory `/root/package/R-2.7.2/tests' make: *** [check] Error 2 ---------------------------------------------------------------------- ---------------------------------------------------- ---------------------------Messege displayed on make install ------------------------------------------------ make[1]: Entering directory `/root/package/R-2.7.2/m4' make[1]: Nothing to be done for `install'. make[1]: Leaving directory `/root/package/R-2.7.2/m4' make[1]: Entering directory `/root/package/R-2.7.2/tools' make[1]: Nothing to be done for `install'. make[1]: Leaving directory `/root/package/R-2.7.2/tools' make[1]: Entering directory `/root/package/R-2.7.2/doc' installing doc ... /usr/bin/install -c -m 644 ../NEWS "/usr/local/lib64/R/doc" help2man: can't get `--version' info from ../bin/R make[1]: *** [R.1] Error 127 make[1]: Leaving directory `/root/package/R-2.7.2/doc' make: *** [install] Error 1 ---------------------------------------------------------------------- ---------------------------------------------------- does anybody having idea how to resolve the problem. Thanks in advance. ALok Ph.D scholar Centre of Computational Biology and Bioinformatics School of Information Technology JNU New Delhi [[alternative HTML version deleted]]
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